An integrated knowledge database dedicated to ncRNAs, especially lncRNAs.

Detail infomation of NONHSAG000554.1

General info


NONCODE GENE IDNONHSAG000554.1
Chromosomechr1
Start Site19814366
End Site19819502
Strand+
Length447
Assemblyhg38
ClassAntisense;
Other Gene VersionsNONHSAG000554.1(old version)

Transcripts in Gene


NONCODE TRANSCRIPT ID

Expression Profile (Data Source:Human Body Map)

adiposeadrenalbrainbrain_Rbreastcolonforeskinheart
heart_RHLF_1HLF_2kidneyliverliver_RlunglymphNode
ovaryplacenta_RprostateskeltalMuscletestestestes_RthyroidwhiteBloodCell
NA

Exosome Expression Profile (Data Source: NCBI GEO)

NA

Conservation Info


  • Chordata
    • Vertebrates
      • Manmals
        • Primates
          • Human
          • Chimp : N/A
          • Gorilla : N/A
          • Orangutan : N/A
          • Rhesus : N/A
        • Rodents
          • Mouse : N/A
          • Rat : N/A
        • Laurasiatheria
          • Pig : N/A
          • Cow : N/A
        • Opossum : N/A
        • Platypus : N/A
      • Birds
        • Chicken : N/A
    • Actinopteryqii
      • Zebrafish : N/A

Note: T = There are transcripts in this region.


Disease related

Disease:

NONCODE IDGene SymbolDisease nameSource DatabaseSource PMID

Mutations:

NONCODE IDSNP IDGWAS traitSource PMID
NONHSAG000554.2rs3820329Gene expression of CDYL2 in peripheral blood monocytes20502693
NONHSAG000554.2rs3806308Ulcerative colitis19122664
NONHSAG000554.2rs3806308Selective immunoglobulin A deficiency (IgAD)20694011
NONHSAG000554.2rs3806308Ulcerative colitis20228799
NONHSAG000554.2rs3806308Gene expression of [probe 1780239 centered at chr10:107913344] in blood21829388
NONHSAG000554.2rs3806308Gene expression of HISPPD2A in blood21829388
NONHSAG000554.2rs3806308Ulcerative colitis19915573
NONHSAG000554.2rs3806308Stabilized warfarin dose18535201
NONHSAG000554.2rs17396847Autism with low IQ20663923

Potential Function


NA