An integrated knowledge database dedicated to ncRNAs, especially lncRNAs.

Detail infomation of NONHSAG001560.1

General info


NONCODE GENE IDNONHSAG001560.1
Chromosomechr1
Start Site54980949
End Site54992274
Strand-
Length428
Assemblyhg38
ClassAntisense;
Other Gene VersionsNONHSAG001560.1(old version)

Transcripts in Gene


NONCODE TRANSCRIPT ID

Expression Profile (Data Source:Human Body Map)

adiposeadrenalbrainbrain_Rbreastcolonforeskinheart
heart_RHLF_1HLF_2kidneyliverliver_RlunglymphNode
ovaryplacenta_RprostateskeltalMuscletestestestes_RthyroidwhiteBloodCell
NA

Exosome Expression Profile (Data Source: NCBI GEO)

NA

Conservation Info


  • Chordata
    • Vertebrates
      • Manmals
        • Primates
          • Human
          • Chimp : N/A
          • Gorilla : N/A
          • Orangutan : N/A
          • Rhesus : N/A
        • Rodents
          • Mouse : N/A
          • Rat : N/A
        • Laurasiatheria
          • Pig : N/A
          • Cow : N/A
        • Opossum : N/A
        • Platypus : N/A
      • Birds
        • Chicken : N/A
    • Actinopteryqii
      • Zebrafish : N/A

Note: T = There are transcripts in this region.


Disease related

Disease:

NONCODE IDGene SymbolDisease nameSource DatabaseSource PMID

Mutations:

NONCODE IDSNP IDGWAS traitSource PMID
NONHSAG001560.2rs2253466LDL cholesterol19060906
NONHSAG001560.2rs1015979Methylation levels at chr1:55218418-55218468 [hg18 coord, probe cg02008416] in Caudal pons20485568
NONHSAG001560.2rs1015979Alzheimer's disease17998437
NONHSAG001560.2rs2495516Methylation levels at chr1:55218418-55218468 [hg18 coord, probe cg02008416] in Caudal pons20485568
NONHSAG001560.2rs2495516Serum ratio of (oleoylcarnitine)/(stearoylcarnitine)21886157
NONHSAG001560.2rs890576Methylation levels at chr1:55218418-55218468 [hg18 coord, probe cg02008416] in Caudal pons20485568
NONHSAG001560.2rs13374752Asthma (childhood onset)23829686
NONHSAG001560.2rs2495513Longevity in long-living individuals21612516
NONHSAG001560.2rs2495513Serum ratio of (4-ethylphenylsulfate)/(allantoin)21886157

Potential Function


NA