An integrated knowledge database dedicated to ncRNAs, especially lncRNAs.

Detail infomation of NONHSAG002555.1

General info


NONCODE GENE IDNONHSAG002555.1
Chromosomechr1
Start Site117596831
End Site117606663
Strand-
Length3339
Assemblyhg38
ClassAntisense;
Other Gene VersionsNONHSAG002555.2(old version)

Transcripts in Gene


NONCODE TRANSCRIPT ID

Expression Profile (Data Source:Human Body Map)

adiposeadrenalbrainbrain_Rbreastcolonforeskinheart
heart_RHLF_1HLF_2kidneyliverliver_RlunglymphNode
ovaryplacenta_RprostateskeltalMuscletestestestes_RthyroidwhiteBloodCell
NA

Exosome Expression Profile (Data Source: NCBI GEO)

NA

Conservation Info


  • Chordata
    • Vertebrates
      • Manmals
        • Primates
          • Human
          • Chimp : N/A
          • Gorilla : N/A
          • Orangutan : N/A
          • Rhesus : N/A
        • Rodents
          • Mouse : N/A
          • Rat : N/A
        • Laurasiatheria
          • Pig : N/A
          • Cow : N/A
        • Opossum : N/A
        • Platypus : N/A
      • Birds
        • Chicken : N/A
    • Actinopteryqii
      • Zebrafish : N/A

Note: T = There are transcripts in this region.


Disease related

Disease:

NONCODE IDGene SymbolDisease nameSource DatabaseSource PMID

Mutations:

NONCODE IDSNP IDGWAS traitSource PMID
NONHSAG002555.3rs17613339Serum ratio of (hexanoylcarnitine)/(octanoylcarnitine)21886157
NONHSAG002555.3rs17613339Serum ratio of (glycylvaline)/(tetradecanedioate)21886157
NONHSAG002555.3rs12409929Total cholesterol20686565
NONHSAG002555.3rs17037436Serum concentration of bilirubin (E,E)*21886157
NONHSAG002555.3rs10489819Gene expression of FAM46C in blood21829388
NONHSAG002555.3rs10489819Total cholesterol20686565
NONHSAG002555.3rs10489820Serum concentration of bilirubin (E,E)*21886157
NONHSAG002555.3rs1975283Gene expression of CLK3 in peripheral blood monocytes20502693
NONHSAG002555.3rs1975283Gene expression of PAFAH1B3 in peripheral blood monocytes20502693
NONHSAG002555.3rs1975283Gene expression of SNORD36A in peripheral blood monocytes20502693
NONHSAG002555.3rs1975283Gene expression of CTR9 in peripheral blood monocytes20502693
NONHSAG002555.3rs1975283Gene expression of TUBG1 in peripheral blood monocytes20502693
NONHSAG002555.3rs1975283Gene expression of TCTN1 in peripheral blood monocytes20502693
NONHSAG002555.3rs1975283Gene expression of PPAN in peripheral blood monocytes20502693
NONHSAG002555.3rs1975283Advanced age-related macular degeneration23455636
NONHSAG002555.3rs1975283Advanced age-related macular degeneration (choroidal neovascularization) vs. no AMD23455636
NONHSAG002555.3rs11587409Total cholesterol20686565
NONHSAG002555.3rs320369Advanced age-related macular degeneration23455636
NONHSAG002555.3rs320368Advanced age-related macular degeneration23455636
NONHSAG002555.3rs1992117Serum ratio of (3-hydroxy-2-ethylpropionate)/(hydroxyisovaleroyl carnitine)21886157
NONHSAG002555.3rs2576570Gene expression of PF4V1 in blood21829388

Potential Function


NA