An integrated knowledge database dedicated to ncRNAs, especially lncRNAs.

Detail infomation of NONHSAG004176.2

General info


NONCODE GENE IDNONHSAG004176.2
Chromosomechr1
Start Site209934527
End Site209937949
Strand-
Length3422
Assemblyhg38
ClassLinc;
Other Gene VersionsNONHSAG004176.1(old version)

Transcripts in Gene


NONCODE TRANSCRIPT ID
NONHSAT009248.2

Expression Profile (Data Source:Human Body Map)

adiposeadrenalbrainbrain_Rbreastcolonforeskinheart
00000000
heart_RHLF_1HLF_2kidneyliverliver_RlunglymphNode
00000000
ovaryplacenta_RprostateskeltalMuscletestestestes_RthyroidwhiteBloodCell
000000.1006230.09715060.0725088
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Exosome Expression Profile (Data Source: NCBI GEO)

A431_cellLine
(Squamous Cell Carcinoma Cell Line Exosomes)
BJ_cellLine
(Foreskin Fibroblast Cell Line Exosomes)
HepG2_cellLine
(Hepatocellular Carcinoma Cell Line Exosomes)
HUVEC_cellLine
(Human Umbilical Vein Endothelial Cell Line Exosomes)
invasive_NFPAs
(Invasive Non-functional Pituitary Adenomas Exosomes)
00.35309400.06201153.42483
non-invasive_NFPAs
(Non-invasive Non-functional Pituitary Adenomas Exosomes)
MCF7_cellLine
(Human Breast Cancer Cell Line Exosomes)
MDA-MB-231_cellLine
(Human Breast Cancer Cell Line Exosomes)
tuberculosis_patients_serum
(Active Tuberculosis Patients Serum Exosomes)
normal_people_blood
(Normal People Blood Exosomes)
2.55376003.122880
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Conservation Info


  • Chordata
    • Vertebrates
    • Actinopteryqii
      • Zebrafish : N/A

Note: T = There are transcripts in this region.


Disease related

Disease:

NONCODE IDGene SymbolDisease nameSource DatabaseSource PMID

Mutations:

NONCODE IDSNP IDGWAS traitSource PMID
NONHSAG004176.2rs6540569Serum concentration of glycerophosphorylcholine (GPC)21886157
NONHSAG004176.2rs6540570Serum ratio of (docosahexaenoate (DHA; 22:6n3))/(oleoylcarnitine)21886157
NONHSAG004176.2rs724054Serum concentration of glycerophosphorylcholine (GPC)21886157
NONHSAG004176.2rs9429829Autism with low IQ20663923
NONHSAG004176.2rs9429830Cleft lip, with or without cleft palate, in Asian ancestry population20436469
NONHSAG004176.2rs9429830Nonsyndromic cleft lip22863734
NONHSAG004176.2rs9429830Cleft lip, with or without cleft palate20436469
NONHSAG004176.2rs9429830Serum ratio of (glycerol 2-phosphate)/(isovalerate)21886157

Potential Function


NA