An integrated knowledge database dedicated to ncRNAs, especially lncRNAs.

Detail infomation of NONHSAG004224.1

General info


NONCODE GENE IDNONHSAG004224.1
Chromosomechr1
Start Site212211267
End Site212285255
Strand-
Length6559
Assemblyhg38
ClassLinc;
Other Gene VersionsNONHSAG004224.2(old version)

Transcripts in Gene


NONCODE TRANSCRIPT ID

Expression Profile (Data Source:Human Body Map)

adiposeadrenalbrainbrain_Rbreastcolonforeskinheart
heart_RHLF_1HLF_2kidneyliverliver_RlunglymphNode
ovaryplacenta_RprostateskeltalMuscletestestestes_RthyroidwhiteBloodCell
NA

Exosome Expression Profile (Data Source: NCBI GEO)

NA

Conservation Info


  • Chordata
    • Vertebrates
      • Manmals
        • Primates
          • Human
          • Chimp : N/A
          • Gorilla : N/A
          • Orangutan : N/A
          • Rhesus : N/A
        • Rodents
          • Mouse : N/A
          • Rat : N/A
        • Laurasiatheria
          • Pig : N/A
          • Cow : N/A
        • Opossum : N/A
        • Platypus : N/A
      • Birds
        • Chicken : N/A
    • Actinopteryqii
      • Zebrafish : N/A

Note: T = There are transcripts in this region.


Disease related

Disease:

NONCODE IDGene SymbolDisease nameSource DatabaseSource PMID

Mutations:

NONCODE IDSNP IDGWAS traitSource PMID
NONHSAG004224.3rs12029444Total cholesterol20686565
NONHSAG004224.3rs11119883Total cholesterol20686565
NONHSAG004224.3rs12073206Total cholesterol20686565
NONHSAG004224.3rs4951580Gene expression of PPP2R5A in blood21829388
NONHSAG004224.3rs4951580Serum ratio of (bilirubin (E,E)*)/(saccharin)21886157
NONHSAG004224.3rs6540731Childhood intelligence23358156
NONHSAG004224.3rs6540731Intelligence (childhood)23358156
NONHSAG004224.3rs7519168Gene expression of PPP2R5A in blood21829388
NONHSAG004224.3rs7519168Serum ratio of (alpha-ketoglutarate)/(stearoylcarnitine)21886157
NONHSAG004224.3rs7519168Hypertension, combined control dataset17554300
NONHSAG004224.3rs7519168Multiple complex diseases17554300
NONHSAG004224.3rs3816912Hypertension, combined control dataset17554300
NONHSAG004224.3rs3816912Multiple complex diseases17554300
NONHSAG004224.3rs11119884Total cholesterol20686565
NONHSAG004224.3rs11119886Serum concentration of 1,6-anhydroglucose21886157
NONHSAG004224.3rs1472226Serum ratio of (bilirubin (Z,Z))/(valerate)21886157
NONHSAG004224.3rs903121Total cholesterol20686565
NONHSAG004224.3rs2012917Total cholesterol20686565
NONHSAG004224.3rs11119887Hypertension, combined control dataset17554300
NONHSAG004224.3rs11119887Multiple complex diseases17554300
NONHSAG004224.3rs10779576Gene expression of MMPL1 in peripheral blood monocytes20502693
NONHSAG004224.3rs10779576Serum concentration of uridine21886157
NONHSAG004224.3rs12127954Serum concentration of 1,6-anhydroglucose21886157
NONHSAG004224.3rs7544225Gene expression of PPP2R5A in peripheral blood monocytes20502693
NONHSAG004224.3rs7544225Serum concentration of valine21886157
NONHSAG004224.3rs1389371Gene expression of PPP2R5A in blood21829388
NONHSAG004224.3rs1389371Gene expression of TMEM206 [probe 222752_s_at] in lymphoblastoid cell lines17873877
NONHSAG004224.3rs1389371Gene expression of PPP2R5A in peripheral blood monocytes20502693
NONHSAG004224.3rs1389371Serum ratio of (ADpSGEGDFXAEGGGVR*)/(cysteine-glutathione disulfide)21886157
NONHSAG004224.3rs12134276Serum concentration of lysine21886157
NONHSAG004224.3rs4951583Gene expression of PPP2R5A in blood21829388
NONHSAG004224.3rs4951583Serum ratio of (octadecanedioate)/(sebacate (decanedioate))21886157
NONHSAG004224.3rs4951583Serum ratio of (1-palmitoleoylglycerophosphocholine*)/(2-oleoylglycerophosphocholine*)21886157
NONHSAG004224.3rs11119889Gene expression of PRPH in peripheral blood monocytes20502693
NONHSAG004224.3rs11119889Gene expression of DAPK3 in peripheral blood monocytes20502693
NONHSAG004224.3rs11119889Serum ratio of (glucose)/(sebacate (decanedioate))21886157
NONHSAG004224.3rs12145451Gene expression of PPP2R5A in blood21829388
NONHSAG004224.3rs12145451Gene expression of PPP2R5A [probeset 202187_s_at] in sputum21949713
NONHSAG004224.3rs12145451Serum ratio of (bilirubin (E,E)*)/(saccharin)21886157
NONHSAG004224.3rs12145451Heart Failure0
NONHSAG004224.3rs351377Gene expression of PPP2R5A in peripheral blood monocytes20502693
NONHSAG004224.3rs351377Serum concentration of valine21886157
NONHSAG004224.3rs10494951Serum ratio of (1-methylurate)/(phenylacetylglutamine)21886157
NONHSAG004224.3rs10494951Waist circumference in controls17463246
NONHSAG004224.3rs10494951Type 2 diabetes17463246
NONHSAG004224.3rs10494951Body mass index (BMI)17463246
NONHSAG004224.3rs12728266Gene expression of FOSL1 in peripheral blood monocytes20502693
NONHSAG004224.3rs12728266Type 2 diabetes17463246
NONHSAG004224.3rs12728266Body mass index (BMI)17463246
NONHSAG004224.3rs12728266Serum ratio of (hexanoylcarnitine)/(octanoylcarnitine)21886157
NONHSAG004224.3rs12728266Waist circumference in controls17463246
NONHSAG004224.3rs351405Gene expression of USP45 in peripheral blood monocytes20502693
NONHSAG004224.3rs351405Serum ratio of (deoxycholate)/(N-(2-furoyl)glycine)21886157
NONHSAG004224.3rs7527863Recurrent major depressive disorder19107115
NONHSAG004224.3rs7527863Gene expression of PPP2R5A [probeset 202187_s_at] in sputum21949713
NONHSAG004224.3rs903119Height17255346
NONHSAG004224.3rs7531219Serum ratio of (pyridoxate)/(riboflavin (Vitamin B2))21886157
NONHSAG004224.3rs351408Gene expression of PPP2R5A in blood21829388
NONHSAG004224.3rs351408Gene expression of TMEM206 [probe 222752_s_at] in lymphoblastoid cell lines17873877
NONHSAG004224.3rs351408Serum ratio of (ADpSGEGDFXAEGGGVR*)/(cysteine-glutathione disulfide)21886157
NONHSAG004224.3rs11589817Serum ratio of (aspartate)/(tyrosine)21886157
NONHSAG004224.3rs11119896Serum ratio of (hydroquinone sulfate)/(taurolithocholate 3-sulfate)21886157
NONHSAG004224.3rs726558Serum ratio of (ascorbate (Vitamin C))/(hyodeoxycholate)21886157
NONHSAG004224.3rs12120009Gene expression of PPP2R5A [probeset 202187_s_at] in sputum21949713
NONHSAG004224.3rs12033204Gene expression of NENF in liver21637794
NONHSAG004224.3rs11119900Serum ratio of (7-methylxanthine)/(HWESASXX*)21886157
NONHSAG004224.3rs351416Gene expression of USP45 in peripheral blood monocytes20502693
NONHSAG004224.3rs351416Serum ratio of (lathosterol)/(taurochenodeoxycholate)21886157
NONHSAG004224.3rs351413Gene expression of PPP2R5A in blood21829388
NONHSAG004224.3rs351413Gene expression of PPP2R5A [probeset 202187_s_at] in sputum21949713

Potential Function


NA