An integrated knowledge database dedicated to ncRNAs, especially lncRNAs.

Detail infomation of NONHSAG005036.3

General info


NONCODE GENE IDNONHSAG005036.3
Chromosomechr10
Start Site3460239
End Site3502866
Strand-
Length13424
Assemblyhg38
ClassLinc;
Other Gene VersionsNONHSAG005036.2(old version)

Transcripts in Gene


NONCODE TRANSCRIPT ID
NONHSAT156525.1
NONHSAT156526.1
NONHSAT156528.1
NONHSAT228682.1
NONHSAT228683.1
NONHSAT228684.1
NONHSAT011029.2
NONHSAT011031.2
NONHSAT011032.2
NONHSAT011033.2
NONHSAT011034.2
NONHSAT011035.2

Expression Profile (Data Source:Human Body Map)

adiposeadrenalbrainbrain_Rbreastcolonforeskinheart
0.03932250.09080590.05221750.1015050.05783570.030041500.0178578
heart_RHLF_1HLF_2kidneyliverliver_RlunglymphNode
0.006705360.05917180.05576250.0340962000.004965450.0559091
ovaryplacenta_RprostateskeltalMuscletestestestes_RthyroidwhiteBloodCell
0.0220230.1389580.03603790.02685520.07225080.2126560.06776730.00645319
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Exosome Expression Profile (Data Source: NCBI GEO)

A431_cellLine
(Squamous Cell Carcinoma Cell Line Exosomes)
BJ_cellLine
(Foreskin Fibroblast Cell Line Exosomes)
HepG2_cellLine
(Hepatocellular Carcinoma Cell Line Exosomes)
HUVEC_cellLine
(Human Umbilical Vein Endothelial Cell Line Exosomes)
invasive_NFPAs
(Invasive Non-functional Pituitary Adenomas Exosomes)
0.9908420.2822961.979430.4663331.95555
non-invasive_NFPAs
(Non-invasive Non-functional Pituitary Adenomas Exosomes)
MCF7_cellLine
(Human Breast Cancer Cell Line Exosomes)
MDA-MB-231_cellLine
(Human Breast Cancer Cell Line Exosomes)
tuberculosis_patients_serum
(Active Tuberculosis Patients Serum Exosomes)
normal_people_blood
(Normal People Blood Exosomes)
1.60775003.980090
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Conservation Info


  • Chordata
    • Vertebrates
      • Manmals
        • Primates
          • Human
          • Chimp : N/A
          • Gorilla : N/A
          • Orangutan : N/A
          • Rhesus : N/A
        • Rodents
          • Mouse : N/A
          • Rat : N/A
        • Laurasiatheria
          • Pig : N/A
          • Cow : N/A
        • Opossum : N/A
        • Platypus : N/A
      • Birds
        • Chicken : N/A
    • Actinopteryqii
      • Zebrafish : N/A

Note: T = There are transcripts in this region.


Disease related

Disease:

NONCODE IDGene SymbolDisease nameSource DatabaseSource PMID

Mutations:

NONCODE IDSNP IDGWAS traitSource PMID
NONHSAG005036.3rs4881177Smoking cessation24665060
NONHSAG005036.3rs2165468Bone mineral density17903296
NONHSAG005036.3rs2165468Femoral neck bone mineral density (BMD)17903296
NONHSAG005036.3rs11251910Smoking cessation24665060
NONHSAG005036.3rs483881Methylation levels at chr6:76010027-76010077 [hg18 coord, probe cg15846718] in Caudal pons20485568
NONHSAG005036.3rs515984Methylation levels at chr6:76010027-76010077 [hg18 coord, probe cg15846718] in Caudal pons20485568
NONHSAG005036.3rs609343Methylation levels at chr6:76010027-76010077 [hg18 coord, probe cg15846718] in Caudal pons20485568
NONHSAG005036.3rs609343Gene expression of WHDC1L1 in peripheral blood monocytes20502693
NONHSAG005036.3rs622898Smoking initiation24665060
NONHSAG005036.3rs11251912Major depressive disorder (broad definition) (females)20038947
NONHSAG005036.3rs1962663Gene expression of SPINK9 in peripheral blood monocytes20502693
NONHSAG005036.3rs1962663Alzheimer's disease17998437
NONHSAG005036.3rs17313838Recurrent early onset major depressive disorder (males)20125088
NONHSAG005036.3rs171352923-Hydroxyisovalerate:Betaine21572414
NONHSAG005036.3rs11251914Hemoglobin0
NONHSAG005036.3rs11251914Hemoglobin0
NONHSAG005036.3rs11251915Major depressive disorder (broad definition) (females)20038947
NONHSAG005036.3rs7099538Major depressive disorder (broad definition) (females)20038947
NONHSAG005036.3rs7095342Gene expression of SPINK9 in peripheral blood monocytes20502693
NONHSAG005036.3rs1070335Gene expression of SPINK9 in peripheral blood monocytes20502693
NONHSAG005036.3rs10904050Smoking initiation24665060
NONHSAG005036.3rs694782Gene expression of SPINK9 in peripheral blood monocytes20502693
NONHSAG005036.3rs7900849Major depressive disorder (broad definition) (females)20038947
NONHSAG005036.3rs2017288Gene expression of KLF6 in liver18462017
NONHSAG005036.3rs959509Coronary artery calcification23870195
NONHSAG005036.3rs7074352Erythrocyte counts0
NONHSAG005036.3rs7092929Coronary artery calcification23870195
NONHSAG005036.3rs7092929Smoking initiation24665060
NONHSAG005036.3rs7097515Coronary artery calcification23870195

Potential Function


NA