An integrated knowledge database dedicated to ncRNAs, especially lncRNAs.

Detail infomation of NONHSAG005548.1

General info


NONCODE GENE IDNONHSAG005548.1
Chromosomechr10
Start Site31166834
End Site31320774
Strand-
Length14052
Assemblyhg38
ClassLinc;
Other Gene VersionsNONHSAG005548.2(old version)

Transcripts in Gene


NONCODE TRANSCRIPT ID

Expression Profile (Data Source:Human Body Map)

adiposeadrenalbrainbrain_Rbreastcolonforeskinheart
heart_RHLF_1HLF_2kidneyliverliver_RlunglymphNode
ovaryplacenta_RprostateskeltalMuscletestestestes_RthyroidwhiteBloodCell
NA

Exosome Expression Profile (Data Source: NCBI GEO)

NA

Conservation Info


  • Chordata
    • Vertebrates
      • Manmals
        • Primates
          • Human
          • Chimp : N/A
          • Gorilla : N/A
          • Orangutan : N/A
          • Rhesus : N/A
        • Rodents
          • Mouse : N/A
          • Rat : N/A
        • Laurasiatheria
          • Pig : N/A
          • Cow : N/A
        • Opossum : N/A
        • Platypus : N/A
      • Birds
        • Chicken : N/A
    • Actinopteryqii
      • Zebrafish : N/A

Note: T = There are transcripts in this region.


Disease related

Disease:

NONCODE IDGene SymbolDisease nameSource DatabaseSource PMID
NONHSAG005548.3NR_024284hepatocellular carcinomaLnc2Cancer25025236
NONHSAG005548.3ZEB1-AS1esophagus squamous cell carcinomaLnc2Cancer26617942
NONHSAG005548.3ZEB1-AS1hepatocellular carcinomaLnc2Cancer26073087
NONHSAG005548.3ZEB1-AS1esophageal squamous cell carcinomaLnc2Cancer26617942
NONHSAG005548.3ZEB1-AS1hepatocellular carcinoma, esophageal squamous cell carcinomaLncRNAWiki0

Mutations:

NONCODE IDSNP IDGWAS traitSource PMID
NONHSAG005548.3rs7903482Aortic root diameter21223598
NONHSAG005548.3rs11008400Major depressive disorder20081856
NONHSAG005548.3rs1764437Height0
NONHSAG005548.3rs1764437Cystatin C in serum20383146
NONHSAG005548.3rs10508758Alzheimer's disease19734902
NONHSAG005548.3rs868790Chronic kidney disease20383146
NONHSAG005548.3rs2995650Chronic kidney disease20383146
NONHSAG005548.3rs2785513Chronic kidney disease20383146
NONHSAG005548.3rs1250307Disc degeneration (lumbar)22993228
NONHSAG005548.3rs1250307Lumbar disc degeneration22993228
NONHSAG005548.3rs1250307Chronic kidney disease20383146
NONHSAG005548.3rs2485003Chronic kidney disease20383146
NONHSAG005548.3rs2485002Chronic kidney disease20383146
NONHSAG005548.3rs2485001Chronic kidney disease20383146
NONHSAG005548.3rs2992917Chronic kidney disease20383146
NONHSAG005548.3rs2484992Lumbar disc degeneration22993228
NONHSAG005548.3rs2484992Disc degeneration (lumbar)22993228
NONHSAG005548.3rs2484990Disc degeneration (lumbar)22993228
NONHSAG005548.3rs2484990Lumbar disc degeneration22993228
NONHSAG005548.3rs7475938Cystatin C in serum20383146
NONHSAG005548.3rs12775515Adiponectin levels22479202
NONHSAG005548.3rs3123688Schizophrenia23358160
NONHSAG005548.3rs1314013Rheumatoid arthritis19503088
NONHSAG005548.3rs1314014Narcolepsy19629137
NONHSAG005548.3rs16932309Alcohol dependence symptoms21314694

Potential Function


NA