An integrated knowledge database dedicated to ncRNAs, especially lncRNAs.

Detail infomation of NONHSAG007553.1

General info


NONCODE GENE IDNONHSAG007553.1
Chromosomechr11
Start Site6733725
End Site6746468
Strand-
Length544
Assemblyhg38
ClassLinc;
Other Gene VersionsNONHSAG007553.1(old version)

Transcripts in Gene


NONCODE TRANSCRIPT ID

Expression Profile (Data Source:Human Body Map)

adiposeadrenalbrainbrain_Rbreastcolonforeskinheart
heart_RHLF_1HLF_2kidneyliverliver_RlunglymphNode
ovaryplacenta_RprostateskeltalMuscletestestestes_RthyroidwhiteBloodCell
NA

Exosome Expression Profile (Data Source: NCBI GEO)

NA

Conservation Info


  • Chordata
    • Vertebrates
      • Manmals
        • Primates
          • Human
          • Chimp : N/A
          • Gorilla : N/A
          • Orangutan : N/A
          • Rhesus : N/A
        • Rodents
          • Mouse : N/A
          • Rat : N/A
        • Laurasiatheria
          • Pig : N/A
          • Cow : N/A
        • Opossum : N/A
        • Platypus : N/A
      • Birds
        • Chicken : N/A
    • Actinopteryqii
      • Zebrafish : N/A

Note: T = There are transcripts in this region.


Disease related

Disease:

NONCODE IDGene SymbolDisease nameSource DatabaseSource PMID

Mutations:

NONCODE IDSNP IDGWAS traitSource PMID
NONHSAG007553.2rs7937594Gene expression of GVIN1 in peripheral blood monocytes20502693
NONHSAG007553.2rs11040993Gene expression of GVIN1 in peripheral blood monocytes20502693
NONHSAG007553.2rs12223054Gene expression of GVIN1 in peripheral blood monocytes20502693
NONHSAG007553.2rs949901Gene expression of [probe 1740050 centered at chr11:6691461] in blood21829388
NONHSAG007553.2rs949901Smoking initiation24665060
NONHSAG007553.2rs951340Gene expression of [probe 1740050 centered at chr11:6691461] in blood21829388
NONHSAG007553.2rs951340Major depressive disorder (broad definition)20038947
NONHSAG007553.2rs10769720Smoking initiation24665060
NONHSAG007553.2rs10769720Major depressive disorder (broad definition)20038947
NONHSAG007553.2rs7949434Gene expression of GVIN1 in peripheral blood monocytes20502693
NONHSAG007553.2rs2067022Gene expression of ZBTB7B in peripheral blood monocytes20502693
NONHSAG007553.2rs11040996Gene expression of GVIN1 in peripheral blood monocytes20502693
NONHSAG007553.2rs1506972Gene expression of GVIN1 in peripheral blood monocytes20502693
NONHSAG007553.2rs7950669Major depressive disorder (broad definition)20038947

Potential Function


GO NumberDescription
GO:0007200phospholipase C-activating G-protein coupled receptor signaling pathway
GO:0007281germ cell development
GO:0007173epidermal growth factor receptor signaling pathway
GO:0071346cellular response to interferon-gamma
GO:0051384response to glucocorticoid
GO:0000902cell morphogenesis
GO:0045747positive regulation of Notch signaling pathway
GO:0006811ion transport
GO:0007040lysosome organization
GO:0030330DNA damage response, signal transduction by p53 class mediator