An integrated knowledge database dedicated to ncRNAs, especially lncRNAs.

Detail infomation of NONHSAG007888.3

General info


NONCODE GENE IDNONHSAG007888.3
Chromosomechr11
Start Site27046994
End Site27234164
Strand-
Length2551
Assemblyhg38
ClassLinc;
Other Gene VersionsNONHSAG007888.2(old version)

Transcripts in Gene


NONCODE TRANSCRIPT ID
NONHSAT230327.1
NONHSAT230328.1
NONHSAT230329.1
NONHSAT230330.1
NONHSAT018466.2
NONHSAT018476.2
NONHSAT018477.2
NONHSAT018481.2
NONHSAT018482.2

Expression Profile (Data Source:Human Body Map)

adiposeadrenalbrainbrain_Rbreastcolonforeskinheart
00.062937400.05786380000.0391077
heart_RHLF_1HLF_2kidneyliverliver_RlunglymphNode
0.2233210000000
ovaryplacenta_RprostateskeltalMuscletestestestes_RthyroidwhiteBloodCell
00.4242990.74770700.02918540.05850690.06385840.00310465
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Exosome Expression Profile (Data Source: NCBI GEO)

A431_cellLine
(Squamous Cell Carcinoma Cell Line Exosomes)
BJ_cellLine
(Foreskin Fibroblast Cell Line Exosomes)
HepG2_cellLine
(Hepatocellular Carcinoma Cell Line Exosomes)
HUVEC_cellLine
(Human Umbilical Vein Endothelial Cell Line Exosomes)
invasive_NFPAs
(Invasive Non-functional Pituitary Adenomas Exosomes)
00.0567341.9656203.79759
non-invasive_NFPAs
(Non-invasive Non-functional Pituitary Adenomas Exosomes)
MCF7_cellLine
(Human Breast Cancer Cell Line Exosomes)
MDA-MB-231_cellLine
(Human Breast Cancer Cell Line Exosomes)
tuberculosis_patients_serum
(Active Tuberculosis Patients Serum Exosomes)
normal_people_blood
(Normal People Blood Exosomes)
4.7277004.918780
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Conservation Info


  • Chordata
    • Vertebrates
      • Manmals
        • Primates
        • Rodents
          • Mouse : N/A
          • Rat : N/A
        • Laurasiatheria
          • Pig : N/A
          • Cow : N/A
        • Opossum : N/A
        • Platypus : N/A
      • Birds
        • Chicken : N/A
    • Actinopteryqii
      • Zebrafish : N/A

Note: T = There are transcripts in this region.


Disease related

Disease:

NONCODE IDGene SymbolDisease nameSource DatabaseSource PMID

Mutations:

NONCODE IDSNP IDGWAS traitSource PMID
NONHSAG007888.3rs7107938Recurrent major depressive disorder20516156
NONHSAG007888.3rs7107938GPR137B gene expression in lymphoblastoid cell lines21775533
NONHSAG007888.3rs7107938Cisplatin cytotoxicity in lung cancer patients treated with platinum-based chemotherapy as measured by cisplatin IC50 in lymphoblastoid cell lines21775533
NONHSAG007888.3rs7107938TTC17 gene expression in lymphoblastoid cell lines21775533
NONHSAG007888.3rs7107938HNRNPU gene expression in lymphoblastoid cell lines21775533
NONHSAG007888.3rs7107938Osteoarthritis19508968
NONHSAG007888.3rs7107938Hand osteoarthritis19508968
NONHSAG007888.3rs7107938Recurrent major depressive disorder19107115
NONHSAG007888.3rs1445317GPR137B gene expression in lymphoblastoid cell lines21775533
NONHSAG007888.3rs1445317TTC17 gene expression in lymphoblastoid cell lines21775533
NONHSAG007888.3rs1445317Cisplatin cytotoxicity in lung cancer patients treated with platinum-based chemotherapy as measured by cisplatin IC50 in lymphoblastoid cell lines21775533
NONHSAG007888.3rs16925449Gene expression of PLK4 in peripheral blood monocytes20502693
NONHSAG007888.3rs7942200Iron levels0
NONHSAG007888.3rs17309656Suicide attempts in bipolar disorder (substance abuse/dependence)21423239
NONHSAG007888.3rs4278476Suicide attempts in bipolar disorder (substance abuse/dependence)21423239
NONHSAG007888.3rs4532991Gene expression of DNMT3A in peripheral blood monocytes20502693
NONHSAG007888.3rs4532991Gene expression of MRAS in peripheral blood monocytes20502693
NONHSAG007888.3rs4532991Type 2 diabetes17463246
NONHSAG007888.3rs4532991APOA1 (apolipoprotein AI)17463246
NONHSAG007888.3rs4328173Suicide attempts in bipolar disorder (substance abuse/dependence)21423239
NONHSAG007888.3rs1372902Fasting blood glucose19060907
NONHSAG007888.3rs11029840Gene expression of OR51T1 in peripheral blood monocytes20502693
NONHSAG007888.3rs17243943Transmission distortion22377632
NONHSAG007888.3rs17243943Maternal transmission distortion22377632
NONHSAG007888.3rs17243943Multiple complex diseases17554300
NONHSAG007888.3rs17243943Type 1 diabetes, combined control dataset, gender differentiated17554300
NONHSAG007888.3rs7949619Suicide attempts in bipolar disorder (substance abuse/dependence)21423239
NONHSAG007888.3rs972904Suicide attempts in bipolar disorder (substance abuse/dependence)21423239
NONHSAG007888.3rs972904Suicide attempts in bipolar disorder21423239
NONHSAG007888.3rs1044273Suicide attempts in bipolar disorder (substance abuse/dependence)21423239
NONHSAG007888.3rs10835119Response to cytidine analogues (gemcitabine)24483146
NONHSAG007888.3rs1972922Gene expression of PRR8 in peripheral blood monocytes20502693
NONHSAG007888.3rs1545265High myopia21095009
NONHSAG007888.3rs1442920Salmonella-induced pyroptosis22837397
NONHSAG007888.3rs1442920Myopia (pathological)21095009
NONHSAG007888.3rs11029853Multiple complex diseases17554300
NONHSAG007888.3rs11029853Type 1 diabetes, Rheumatoid arthritis, Crohn's disease, combined case analysis17554300
NONHSAG007888.3rs11029853Transmission distortion22377632
NONHSAG007888.3rs12277945Gene expression of miR-369-5p in fibroblasts21147911
NONHSAG007888.3rs920698Gene expression of CDK9 in peripheral blood monocytes20502693
NONHSAG007888.3rs7938462Hypertriglyceridemia23505323
NONHSAG007888.3rs7938462Gene expression of CCDC34 in blood21829388
NONHSAG007888.3rs4923429Type 2 diabetes17463246
NONHSAG007888.3rs4923429Insulinogenic index17463246
NONHSAG007888.3rs1442933Advanced age-related macular degeneration (geographic atrophy)23455636
NONHSAG007888.3rs7939668Hypertriglyceridemia23505323
NONHSAG007888.3rs894517Gene expression of TBX21 in peripheral blood monocytes20502693
NONHSAG007888.3rs10501080Gene expression of NFAM1 in peripheral blood monocytes20502693
NONHSAG007888.3rs10835128Gene expression of TBX21 in peripheral blood monocytes20502693
NONHSAG007888.3rs4091734Methylation levels at chr13:79813466-79813516 [hg18 coord, probe cg22417789] in Caudal pons20485568
NONHSAG007888.3rs7106351Methylation levels at chrX:100800794-100800844 [hg18 coord, probe cg19055639] in Caudal pons20485568
NONHSAG007888.3rs2245826Gene expression of MKRN2 in peripheral blood monocytes20502693
NONHSAG007888.3rs16916780Gene expression of SRCAP in peripheral blood monocytes20502693

Potential Function


NA