An integrated knowledge database dedicated to ncRNAs, especially lncRNAs.

Detail infomation of NONHSAG011120.1

General info


NONCODE GENE IDNONHSAG011120.1
Chromosomechr12
Start Site49949962
End Site49962924
Strand-
Length5461
Assemblyhg38
ClassLinc;
Other Gene VersionsNONHSAG011120.2(old version)

Transcripts in Gene


NONCODE TRANSCRIPT ID

Expression Profile (Data Source:Human Body Map)

adiposeadrenalbrainbrain_Rbreastcolonforeskinheart
heart_RHLF_1HLF_2kidneyliverliver_RlunglymphNode
ovaryplacenta_RprostateskeltalMuscletestestestes_RthyroidwhiteBloodCell
NA

Exosome Expression Profile (Data Source: NCBI GEO)

NA

Conservation Info


  • Chordata
    • Vertebrates
      • Manmals
        • Primates
          • Human
          • Chimp : N/A
          • Gorilla : N/A
          • Orangutan : N/A
          • Rhesus : N/A
        • Rodents
          • Mouse : N/A
          • Rat : N/A
        • Laurasiatheria
          • Pig : N/A
          • Cow : N/A
        • Opossum : N/A
        • Platypus : N/A
      • Birds
        • Chicken : N/A
    • Actinopteryqii
      • Zebrafish : N/A

Note: T = There are transcripts in this region.


Disease related

Disease:

NONCODE IDGene SymbolDisease nameSource DatabaseSource PMID

Mutations:

NONCODE IDSNP IDGWAS traitSource PMID
NONHSAG011120.3rs3741559Gene expression of ANKRD47 in peripheral blood monocytes20502693
NONHSAG011120.3rs3741559Gene expression of LOC144233 [probe ILMN_18065] in osteoblasts with treatment interaction21283786
NONHSAG011120.3rs3741559Gene expression of ACCN2 in liver18462017
NONHSAG011120.3rs461872Methylation levels at chr12:48642088-48642138 [hg18 coord, probe cg23855989] in Cerebellum20485568
NONHSAG011120.3rs461872Methylation levels at chr12:48642088-48642138 [hg18 coord, probe cg23855989] in Caudal pons20485568
NONHSAG011120.3rs461872Bipolar disorder22182935
NONHSAG011120.3rs467199Gene expression of ANKRD47 in peripheral blood monocytes20502693
NONHSAG011120.3rs467323Gene expression of LASS5 in blood21829388
NONHSAG011120.3rs3759129Methylation levels at chr12:48642088-48642138 [hg18 coord, probe cg23855989] in Cerebellum20485568
NONHSAG011120.3rs3759129Methylation levels at chr12:48642088-48642138 [hg18 coord, probe cg23855989] in Frontal cortex20485568
NONHSAG011120.3rs3759129Methylation levels at chr12:48642088-48642138 [hg18 coord, probe cg23855989] in Caudal pons20485568
NONHSAG011120.3rs3759129Methylation levels at chr12:48642088-48642138 [hg18 coord, probe cg23855989] in Temporal cortex20485568
NONHSAG011120.3rs3759129Gene expression of AQP5 (probeID ILMN_1807036) in cerebellum in Alzheimer's disease cases and controls22685416
NONHSAG011120.3rs3759129Gene expression of AQP5 (probeID ILMN_1807036) in cerebellum in Alzheimer's disease cases22685416
NONHSAG011120.3rs3759129Gene expression of LASS5 in blood21829388
NONHSAG011120.3rs3759129Gene expression of AQP5 (probeID ILMN_1807036) in cerebellum in non-Alzheimer's disease samples22685416

Potential Function


GO NumberDescription
GO:0035690cellular response to drug
GO:0007155cell adhesion
GO:0006366transcription from RNA polymerase II promoter
GO:0051384response to glucocorticoid
GO:0030048actin filament-based movement
GO:0048745smooth muscle tissue development
GO:0007281germ cell development
GO:0008380RNA splicing
GO:0003360brainstem development
GO:0007200phospholipase C-activating G-protein coupled receptor signaling pathway