An integrated knowledge database dedicated to ncRNAs, especially lncRNAs.

Detail infomation of NONHSAG029906.3

General info


NONCODE GENE IDNONHSAG029906.3
Chromosomechr2
Start Site176167383
End Site176188959
Strand-
Length6691
Assemblyhg38
ClassLinc;
Other Gene VersionsNONHSAG029906.2(old version)

Transcripts in Gene


NONCODE TRANSCRIPT ID
NONHSAT185940.1
NONHSAT185941.1
NONHSAT242773.1
NONHSAT242774.1
NONHSAT075636.2
NONHSAT075637.2
NONHSAT075638.2
NONHSAT075639.2
NONHSAT075640.2
NONHSAT075641.2
NONHSAT075642.2
NONHSAT075643.2
NONHSAT075644.2
NONHSAT075645.2
NONHSAT075646.2
NONHSAT075647.2

Expression Profile (Data Source:Human Body Map)

adiposeadrenalbrainbrain_Rbreastcolonforeskinheart
2.114541.875641.043842.060571.381572.4076800.320931
heart_RHLF_1HLF_2kidneyliverliver_RlunglymphNode
00.005156970.005102135.83091002.199061.82749
ovaryplacenta_RprostateskeltalMuscletestestestes_RthyroidwhiteBloodCell
2.874070.06398021.852420.19115410.14829.677290.3911690
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Exosome Expression Profile (Data Source: NCBI GEO)

A431_cellLine
(Squamous Cell Carcinoma Cell Line Exosomes)
BJ_cellLine
(Foreskin Fibroblast Cell Line Exosomes)
HepG2_cellLine
(Hepatocellular Carcinoma Cell Line Exosomes)
HUVEC_cellLine
(Human Umbilical Vein Endothelial Cell Line Exosomes)
invasive_NFPAs
(Invasive Non-functional Pituitary Adenomas Exosomes)
00.072432430.902824.59825.94716
non-invasive_NFPAs
(Non-invasive Non-functional Pituitary Adenomas Exosomes)
MCF7_cellLine
(Human Breast Cancer Cell Line Exosomes)
MDA-MB-231_cellLine
(Human Breast Cancer Cell Line Exosomes)
tuberculosis_patients_serum
(Active Tuberculosis Patients Serum Exosomes)
normal_people_blood
(Normal People Blood Exosomes)
6.18168006.035110.726792
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Conservation Info


  • Chordata
    • Vertebrates
      • Manmals
        • Primates
          • Human
          • Chimp : N/A
          • Gorilla : N/A
          • Orangutan : N/A
          • Rhesus : N/A
        • Rodents
          • Mouse : N/A
          • Rat : N/A
        • Laurasiatheria
          • Pig : N/A
          • Cow : N/A
        • Opossum : N/A
        • Platypus : N/A
      • Birds
        • Chicken : N/A
    • Actinopteryqii
      • Zebrafish : N/A

Note: T = There are transcripts in this region.


Disease related

Disease:

NONCODE IDGene SymbolDisease nameSource DatabaseSource PMID
NONHSAG029906.3HOXD-AS1bladder cancerLnc2Cancer27328915
NONHSAG029906.3HOXD-AS1neuroblastomaLnc2Cancer25522241
NONHSAG029906.3HAGLRurinary bladder cancerLnc2Cancer27328915
NONHSAG029906.3HAGLRneuroblastomaMNDR25522241
NONHSAG029906.3HAGLRneuroblastomaLncRNAWiki0

Mutations:

NONCODE IDSNP IDGWAS traitSource PMID
NONHSAG029906.3rs2301301Ovarian cancer20852632
NONHSAG029906.3rs2301301Depression scale of the Revised NEO Personality Inventory20800221
NONHSAG029906.3rs2301301Ovarian cancer (serous type)20852632
NONHSAG029906.3rs2301301Depression (quantitative trait)20800221
NONHSAG029906.3rs13017511Depression scale of the Revised NEO Personality Inventory20800221
NONHSAG029906.3rs13017511Depression (quantitative trait)20800221
NONHSAG029906.3rs711830Betaine:Tyrosine21572414
NONHSAG029906.3rs711830Serum ratio of (gamma-glutamylglutamate)/(phenyllactate (PLA))21886157
NONHSAG029906.3rs9141Depression scale of the Revised NEO Personality Inventory20800221
NONHSAG029906.3rs9141Depression (quantitative trait)20800221
NONHSAG029906.3rs7600360Serum ratio of (caproate (6:0))/(heptanoate (7:0))21886157
NONHSAG029906.3rs2072590Ovarian cancer (serous type)20852632
NONHSAG029906.3rs2072590Ovarian cancer20852632
NONHSAG029906.3rs2072590Ovarian cancer20852632
NONHSAG029906.3rs2072590Ovarian cancer23535730
NONHSAG029906.3rs2072590Ovarian cancer23535730
NONHSAG029906.3rs2072590Ovarian cancer (mucinous type)20852632
NONHSAG029906.3rs2072590Obesity with early age of onset (age >2)22484627
NONHSAG029906.3rs1374325Depression scale of the Revised NEO Personality Inventory20800221
NONHSAG029906.3rs1374325Depression (quantitative trait)20800221

Potential Function


NA