An integrated knowledge database dedicated to ncRNAs, especially lncRNAs.

Detail infomation of NONHSAG032872.2

General info


NONCODE GENE IDNONHSAG032872.2
Chromosomechr21
Start Site39406356
End Site39426035
Strand+
Length3354
Assemblyhg38
ClassLinc;
Other Gene VersionsNONHSAG032872.2(old version)

Transcripts in Gene


NONCODE TRANSCRIPT ID

Expression Profile (Data Source:Human Body Map)


adiposeadrenalbrainbrain_Rbreastcolon
foreskinheartheart_RHLF_1HLF_2kidney
liverliver_RlunglymphNodeovaryplacenta_R
prostateskeltalMuscletestestestes_RthyroidwhiteBloodCell
NA

Exosome Expression Profile (Data Source: NCBI GEO)


NA

Conservation Info


  • Chordata
    • Vertebrates
      • Manmals
        • Primates
          • Human
          • Chimp : N/A
          • Gorilla : N/A
          • Orangutan : N/A
          • Rhesus : N/A
        • Rodents
          • Mouse : N/A
          • Rat : N/A
        • Laurasiatheria
          • Pig : N/A
          • Cow : N/A
        • Opossum : N/A
        • Platypus : N/A
      • Birds
        • Chicken : N/A
    • Actinopteryqii
      • Zebrafish : N/A

Note: T = There are transcripts in this region.


Disease related


Disease:

NONCODE IDGene SymbolDisease nameSource DatabaseSource PMID

Mutations:

NONCODE IDSNP IDGWAS traitSource PMID
NONHSAG032872.3rs2837015Gene expression of HMGN1 (probeID ILMN_2151579) in temporal cortex in Alzheimer's disease cases and controls22685416
NONHSAG032872.3rs2837015Gene expression of HMGN1 (probeID ILMN_2151579) in cerebellum in Alzheimer's disease cases and controls22685416
NONHSAG032872.3rs2837017Gene expression of WRB in peripheral blood monocytes20502693
NONHSAG032872.3rs2837017Gene expression of WRB in blood21829388
NONHSAG032872.3rs2837017Gene expression of HMGN1 in blood21829388
NONHSAG032872.3rs2837017Gene expression of HMGN1 in peripheral blood monocytes20502693
NONHSAG032872.3rs2837017Gene expression of BRWD1 in blood21829388
NONHSAG032872.3rs2837017Gene expression of HMGN1 (probeID ILMN_2151579) in temporal cortex in Alzheimer's disease cases and controls22685416
NONHSAG032872.3rs2837017Gene expression of WRB in normal prepouch ileum23474282
NONHSAG032872.3rs2837017Gene expression of HMGN1 (probeID ILMN_2151579) in cerebellum in Alzheimer's disease cases and controls22685416
NONHSAG032872.3rs2837018Gene expression of WRB in peripheral blood monocytes20502693
NONHSAG032872.3rs2837018Gene expression of HMGN1 in peripheral blood monocytes20502693
NONHSAG032872.3rs2837018Methylation levels at chr21:39737855-39737905 [hg18 coord, probe cg23704703] in Frontal cortex20485568
NONHSAG032872.3rs2837019Methylation levels at chr21:39737855-39737905 [hg18 coord, probe cg23704703] in Frontal cortex20485568
NONHSAG032872.3rs2837020Gene expression of HMGN1 in blood21829388
NONHSAG032872.3rs2837020Gene expression of WRB in blood21829388
NONHSAG032872.3rs2837020Gene expression of BRWD1 in blood21829388
NONHSAG032872.3rs2837022Gene expression of HMGN1 in blood21829388
NONHSAG032872.3rs2837022Gene expression of WRB in blood21829388
NONHSAG032872.3rs2837022Gene expression of WRB in normal prepouch ileum23474282
NONHSAG032872.3rs2837022Gene expression of BRWD1 in blood21829388
NONHSAG032872.3rs2837022Gene expression change of LCA5L (ENSG00000157578) in dendritic cells after treatment with Mycobacterium tuberculosis22233810
NONHSAG032872.3rs7276981Methylation levels at chr21:39737855-39737905 [hg18 coord, probe cg23704703] in Frontal cortex20485568
NONHSAG032872.3rs2246078Methylation levels at chr21:39737855-39737905 [hg18 coord, probe cg23704703] in Frontal cortex20485568