An integrated knowledge database dedicated to ncRNAs, especially lncRNAs.

Detail infomation of NONHSAG052523.1

General info


NONCODE GENE IDNONHSAG052523.1
Chromosomechr9
Start Site70193996
End Site70258874
Strand-
Length19567
Assemblyhg38
ClassLinc;
Other Gene VersionsNONHSAG052523.2(old version)

Transcripts in Gene


NONCODE TRANSCRIPT ID

Expression Profile (Data Source:Human Body Map)

adiposeadrenalbrainbrain_Rbreastcolonforeskinheart
heart_RHLF_1HLF_2kidneyliverliver_RlunglymphNode
ovaryplacenta_RprostateskeltalMuscletestestestes_RthyroidwhiteBloodCell
NA

Exosome Expression Profile (Data Source: NCBI GEO)

NA

Conservation Info


  • Chordata
    • Vertebrates
      • Manmals
        • Primates
          • Human
          • Chimp : N/A
          • Gorilla : N/A
          • Orangutan : N/A
          • Rhesus : N/A
        • Rodents
          • Mouse : N/A
          • Rat : N/A
        • Laurasiatheria
          • Pig : N/A
          • Cow : N/A
        • Opossum : N/A
        • Platypus : N/A
      • Birds
        • Chicken : N/A
    • Actinopteryqii
      • Zebrafish : N/A

Note: T = There are transcripts in this region.


Disease related

Disease:

NONCODE IDGene SymbolDisease nameSource DatabaseSource PMID

Mutations:

NONCODE IDSNP IDGWAS traitSource PMID
NONHSAG052523.3rs2148853Lung function (forced expiratory volume in 1 second)17255346
NONHSAG052523.3rs2148853Neuroblastoma (brain cancer)21124317
NONHSAG052523.3rs2871297Biliary atresia20460270
NONHSAG052523.3rs2871297Biliary atresia20460270
NONHSAG052523.3rs1073540Biploar disorder (bipolar schizoaffective disorder)19567891
NONHSAG052523.3rs3858107Kawasaki disease21221998

Potential Function


GO NumberDescription
GO:0007155cell adhesion
GO:0006366transcription from RNA polymerase II promoter
GO:0016311dephosphorylation
GO:0043691reverse cholesterol transport
GO:0002138retinoic acid biosynthetic process
GO:0016056rhodopsin mediated signaling pathway
GO:0042632cholesterol homeostasis
GO:0034375high-density lipoprotein particle remodeling
GO:0034380high-density lipoprotein particle assembly
GO:0033344cholesterol efflux