An integrated knowledge database dedicated to ncRNAs, especially lncRNAs.

Detail infomation of NONHSAG052523.3

General info


NONCODE GENE IDNONHSAG052523.3
Chromosomechr9
Start Site70193996
End Site70258874
Strand-
Length19567
Assemblyhg38
ClassLinc;
Other Gene VersionsNONHSAG052523.2(old version)

Transcripts in Gene


NONCODE TRANSCRIPT ID
NONHSAT220820.1
NONHSAT220821.1
NONHSAT257494.1
NONHSAT257495.1
NONHSAT257496.1
NONHSAT257497.1
NONHSAT257498.1
NONHSAT257499.1
NONHSAT131806.2
NONHSAT131808.2
NONHSAT131810.2

Expression Profile (Data Source:Human Body Map)

adiposeadrenalbrainbrain_Rbreastcolonforeskinheart
0.08339880.2976440.07811570.05142390.3116440.3266130.2387690.181527
heart_RHLF_1HLF_2kidneyliverliver_RlunglymphNode
0.2602590.2903090.295190.2273910.02777040.1002930.1710380.144297
ovaryplacenta_RprostateskeltalMuscletestestestes_RthyroidwhiteBloodCell
0.3556510.1755360.3548380.0257830.2270340.7263680.2458690.0207192
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Exosome Expression Profile (Data Source: NCBI GEO)

A431_cellLine
(Squamous Cell Carcinoma Cell Line Exosomes)
BJ_cellLine
(Foreskin Fibroblast Cell Line Exosomes)
HepG2_cellLine
(Hepatocellular Carcinoma Cell Line Exosomes)
HUVEC_cellLine
(Human Umbilical Vein Endothelial Cell Line Exosomes)
invasive_NFPAs
(Invasive Non-functional Pituitary Adenomas Exosomes)
0.679779.228531.56282.053514.03823
non-invasive_NFPAs
(Non-invasive Non-functional Pituitary Adenomas Exosomes)
MCF7_cellLine
(Human Breast Cancer Cell Line Exosomes)
MDA-MB-231_cellLine
(Human Breast Cancer Cell Line Exosomes)
tuberculosis_patients_serum
(Active Tuberculosis Patients Serum Exosomes)
normal_people_blood
(Normal People Blood Exosomes)
5.55788005.198990.0965305
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Conservation Info


  • Chordata
    • Vertebrates
      • Manmals
        • Primates
          • Human
          • Chimp : N/A
          • Gorilla : N/A
          • Orangutan : N/A
          • Rhesus : N/A
        • Rodents
          • Mouse : N/A
          • Rat : N/A
        • Laurasiatheria
          • Pig : N/A
          • Cow : N/A
        • Opossum : N/A
        • Platypus : N/A
      • Birds
        • Chicken : N/A
    • Actinopteryqii
      • Zebrafish : N/A

Note: T = There are transcripts in this region.


Disease related

Disease:

NONCODE IDGene SymbolDisease nameSource DatabaseSource PMID

Mutations:

NONCODE IDSNP IDGWAS traitSource PMID
NONHSAG052523.3rs2148853Lung function (forced expiratory volume in 1 second)17255346
NONHSAG052523.3rs2148853Neuroblastoma (brain cancer)21124317
NONHSAG052523.3rs2871297Biliary atresia20460270
NONHSAG052523.3rs2871297Biliary atresia20460270
NONHSAG052523.3rs1073540Biploar disorder (bipolar schizoaffective disorder)19567891
NONHSAG052523.3rs3858107Kawasaki disease21221998

Potential Function


GO NumberDescription
GO:0007155cell adhesion
GO:0006366transcription from RNA polymerase II promoter
GO:0016311dephosphorylation
GO:0043691reverse cholesterol transport
GO:0002138retinoic acid biosynthetic process
GO:0016056rhodopsin mediated signaling pathway
GO:0042632cholesterol homeostasis
GO:0034375high-density lipoprotein particle remodeling
GO:0034380high-density lipoprotein particle assembly
GO:0033344cholesterol efflux