An integrated knowledge database dedicated to ncRNAs, especially lncRNAs.

Detail infomation of NONHSAG053508.2

General info


NONCODE GENE IDNONHSAG053508.2
Chromosomechr9
Start Site127934502
End Site127940953
Strand+
Length2522
Assemblyhg38
ClassLinc;
Other Gene VersionsNONHSAG053508.1(old version)

Transcripts in Gene


NONCODE TRANSCRIPT ID
NONHSAT220201.1
NONHSAT220202.1
NONHSAT134870.2
NONHSAT134873.2
NONHSAT134874.2
NONHSAT134875.2
NONHSAT134876.2
NONHSAT134877.2
NONHSAT134878.2
NONHSAT134879.2

Expression Profile (Data Source:Human Body Map)

adiposeadrenalbrainbrain_Rbreastcolonforeskinheart
0.07095142.197880.5470450.4287440.2383590.1695550.05979620.031493
heart_RHLF_1HLF_2kidneyliverliver_RlunglymphNode
0.07535160.1442230.08560121.565450.4139050.03963940.292390.770249
ovaryplacenta_RprostateskeltalMuscletestestestes_RthyroidwhiteBloodCell
0.4568810.1431720.2159940.07586620.6699761.682090.2667951.04336
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Exosome Expression Profile (Data Source: NCBI GEO)

A431_cellLine
(Squamous Cell Carcinoma Cell Line Exosomes)
BJ_cellLine
(Foreskin Fibroblast Cell Line Exosomes)
HepG2_cellLine
(Hepatocellular Carcinoma Cell Line Exosomes)
HUVEC_cellLine
(Human Umbilical Vein Endothelial Cell Line Exosomes)
invasive_NFPAs
(Invasive Non-functional Pituitary Adenomas Exosomes)
5.274018.91185.862924.143979.13379
non-invasive_NFPAs
(Non-invasive Non-functional Pituitary Adenomas Exosomes)
MCF7_cellLine
(Human Breast Cancer Cell Line Exosomes)
MDA-MB-231_cellLine
(Human Breast Cancer Cell Line Exosomes)
tuberculosis_patients_serum
(Active Tuberculosis Patients Serum Exosomes)
normal_people_blood
(Normal People Blood Exosomes)
9.8873008.658014.27897
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Conservation Info


  • Chordata
    • Vertebrates
      • Manmals
        • Primates
          • Human
          • Chimp : N/A
          • Gorilla : N/A
          • Orangutan : N/A
          • Rhesus : N/A
        • Rodents
          • Mouse : N/A
          • Rat : N/A
        • Laurasiatheria
          • Pig : N/A
          • Cow : N/A
        • Opossum : N/A
        • Platypus : N/A
      • Birds
        • Chicken : N/A
    • Actinopteryqii
      • Zebrafish : N/A

Note: T = There are transcripts in this region.


Disease related

Disease:

NONCODE IDGene SymbolDisease nameSource DatabaseSource PMID

Mutations:

NONCODE IDSNP IDGWAS traitSource PMID
NONHSAG053508.2rs7997Gene expression of ST6GALNAC4 in peripheral blood monocytes20502693
NONHSAG053508.2rs6781Differential exon level expression of DPM2 [probe 3226241] in peripheral blood mononuclear cells19222302
NONHSAG053508.2rs6781Differential exon level expression of DPM2 [probe 3226241] in brain cortex19222302
NONHSAG053508.2rs6781Gene expression of ST6GALNAC4 in peripheral blood monocytes20502693
NONHSAG053508.2rs6781Gene expression of DPM2 [probe 209391_at] in prefrontal cortex20351726
NONHSAG053508.2rs3824528Gene expression of ST6GALNAC4 in peripheral blood monocytes20502693
NONHSAG053508.2rs3739821Differential exon level expression of DPM2 [probe 3226241] in brain cortex19222302
NONHSAG053508.2rs3739821Differential exon level expression of DPM2 [probe 3226241] in peripheral blood mononuclear cells19222302
NONHSAG053508.2rs3824527Gene expression of ST6GALNAC4 in peripheral blood monocytes20502693
NONHSAG053508.2rs3824527Gene expression of DOK7 in peripheral blood monocytes20502693

Potential Function


NA