An integrated knowledge database dedicated to ncRNAs, especially lncRNAs.

Detail infomation of NONHSAG054084.1

General info


NONCODE GENE IDNONHSAG054084.1
ChromosomechrX
Start Site15789680
End Site15804877
Strand+
Length2291
Assemblyhg38
ClassLinc;
Other Gene VersionsNONHSAG054084.1(old version)

Transcripts in Gene


NONCODE TRANSCRIPT ID

Expression Profile (Data Source:Human Body Map)

adiposeadrenalbrainbrain_Rbreastcolonforeskinheart
hela_RHLF_1HLF_2kidneyliverliver_RlunglymphNode
ovaryplacenta_RprostateskeltalMuscletestestestes_RthyroidwhiteBloodCell
NA

Exosome Expression Profile (Data Source: NCBI GEO)

NA

Conservation Info


  • Chordata
    • Vertebrates
      • Manmals
        • Primates
          • Human
          • Chimp : N/A
          • Gorilla : N/A
          • Orangutan : N/A
          • Rhesus : N/A
        • Rodents
          • Mouse : N/A
          • Rat : N/A
        • Laurasiatheria
          • Pig : N/A
          • Cow : N/A
        • Opossum : N/A
        • Platypus : N/A
      • Birds
        • Chicken : N/A
    • Actinopteryqii
      • Zebrafish : N/A

Note: T = There are transcripts in this region.


Disease related

Disease:

NONCODE IDGene SymbolDisease nameSource DatabaseSource PMID

Mutations:

NONCODE IDSNP IDGWAS traitSource PMID
NONHSAG054084.2rs6527642Gene expression of ZRSR2 in blood21829388
NONHSAG054084.2rs6527642Gene expression of CA5B in blood21829388
NONHSAG054084.2rs6527642Methylation levels at chrX:15666635-15666685 [hg18 coord, probe cg25376316] in Temporal cortex20485568
NONHSAG054084.2rs6527642Methylation levels at chrX:15666635-15666685 [hg18 coord, probe cg25376316] in Frontal cortex20485568
NONHSAG054084.2rs6527642Methylation levels at chrX:15666635-15666685 [hg18 coord, probe cg25376316] in Cerebellum20485568
NONHSAG054084.2rs6527642Gene expression of AP1S2 in blood21829388
NONHSAG054084.2rs5936057Differential exon level expression of ZRSR2 [probe 3969971] in brain cortex19222302
NONHSAG054084.2rs5936059Gene expression of AP1S2 in peripheral blood monocytes20502693
NONHSAG054084.2rs5936059Gene expression of AP1S2 in men in peripheral blood monocytes20502693
NONHSAG054084.2rs2238917Gene expression of AP1S2 in peripheral blood monocytes20502693
NONHSAG054084.2rs2238917Gene expression of AP1S2 in men in peripheral blood monocytes20502693

Potential Function


GO NumberDescription
GO:0016486peptide hormone processing
GO:0045606positive regulation of epidermal cell differentiation
GO:0033197response to vitamin E
GO:0032964collagen biosynthetic process
GO:0019547arginine catabolic process to ornithine
GO:0014075response to amine
GO:0010963regulation of L-arginine import
GO:0010269response to selenium ion
GO:0000050urea cycle
GO:0070201regulation of establishment of protein localization