An integrated knowledge database dedicated to ncRNAs, especially lncRNAs.

Detail infomation of NONHSAG059345.2

General info


NONCODE GENE IDNONHSAG059345.2
Chromosomechr1
Start Site107964054
End Site108076020
Strand+
Length17624
Assemblyhg38
ClassAntisense;
Other Gene VersionsNONHSAG059345.1(old version)

Transcripts in Gene


NONCODE TRANSCRIPT ID
NONHSAT149506.1
NONHSAT149507.1
NONHSAT149508.1
NONHSAT154010.1
NONHSAT154011.1
NONHSAT154012.1
NONHSAT154013.1
NONHSAT225322.1
NONHSAT225323.1
NONHSAT225324.1
NONHSAT225325.1
NONHSAT225326.1
NONHSAT225327.1
NONHSAT225328.1
NONHSAT225329.1
NONHSAT225330.1
NONHSAT225331.1
NONHSAT225332.1
NONHSAT004970.2
NONHSAT004972.2
NONHSAT004974.2
NONHSAT004975.2

Expression Profile (Data Source:Human Body Map)

adiposeadrenalbrainbrain_Rbreastcolonforeskinheart
0.01850440.1821250.005735910.009940520.008009850.0059890900.00417296
heart_RHLF_1HLF_2kidneyliverliver_RlunglymphNode
0.0254630.003841690.0002715010.006532130.0026838700.01024540.0473256
ovaryplacenta_RprostateskeltalMuscletestestestes_RthyroidwhiteBloodCell
0.005423660.01429770.001709980.002780480.01547530.02114260.01743370.0530767
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Exosome Expression Profile (Data Source: NCBI GEO)

A431_cellLine
(Squamous Cell Carcinoma Cell Line Exosomes)
BJ_cellLine
(Foreskin Fibroblast Cell Line Exosomes)
HepG2_cellLine
(Hepatocellular Carcinoma Cell Line Exosomes)
HUVEC_cellLine
(Human Umbilical Vein Endothelial Cell Line Exosomes)
invasive_NFPAs
(Invasive Non-functional Pituitary Adenomas Exosomes)
00.01107511.5502705.46555
non-invasive_NFPAs
(Non-invasive Non-functional Pituitary Adenomas Exosomes)
MCF7_cellLine
(Human Breast Cancer Cell Line Exosomes)
MDA-MB-231_cellLine
(Human Breast Cancer Cell Line Exosomes)
tuberculosis_patients_serum
(Active Tuberculosis Patients Serum Exosomes)
normal_people_blood
(Normal People Blood Exosomes)
4.41873005.010260.427155
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Conservation Info


  • Chordata
    • Vertebrates
      • Manmals
        • Primates
          • Human
          • Chimp : N/A
          • Gorilla : N/A
          • Orangutan : N/A
          • Rhesus : N/A
        • Rodents
          • Mouse : N/A
          • Rat : N/A
        • Laurasiatheria
          • Pig : N/A
          • Cow : N/A
        • Opossum : N/A
        • Platypus : N/A
      • Birds
        • Chicken : N/A
    • Actinopteryqii
      • Zebrafish : N/A

Note: T = There are transcripts in this region.


Disease related

Disease:

NONCODE IDGene SymbolDisease nameSource DatabaseSource PMID

Mutations:

NONCODE IDSNP IDGWAS traitSource PMID
NONHSAG059345.2rs375302Serum ratio of (1-methylxanthine)/(lathosterol)21886157
NONHSAG059345.2rs345258Gene expression of 40787 in peripheral blood monocytes20502693
NONHSAG059345.2rs345258Gene expression of HSH2D in peripheral blood monocytes20502693
NONHSAG059345.2rs345258Gene expression of RRP15 in peripheral blood monocytes20502693
NONHSAG059345.2rs345258Gene expression of LARP2 in peripheral blood monocytes20502693
NONHSAG059345.2rs345258Gene expression of MAPK6 in peripheral blood monocytes20502693
NONHSAG059345.2rs1412655Serum ratio of (1-arachidonoylglycerophosphoethanolamine*)/(stearidonate (18:4n3))21886157
NONHSAG059345.2rs1412655Serum ratio of (gamma-glutamylisoleucine*)/(indolelactate)21886157
NONHSAG059345.2rs73143Gene expression of UBE2J1 in peripheral blood monocytes20502693
NONHSAG059345.2rs73143Gene expression of LARP2 in peripheral blood monocytes20502693
NONHSAG059345.2rs73143Gene expression of ATPBD3 in peripheral blood monocytes20502693
NONHSAG059345.2rs73143Serum ratio of (1-methylxanthine)/(lathosterol)21886157
NONHSAG059345.2rs73143Fasting blood glucose20081858
NONHSAG059345.2rs1571965HDL cholesterol particle diameter23263444
NONHSAG059345.2rs12121990Prostate cancer23555315
NONHSAG059345.2rs2336645HIV-1 seropositive nonprogression19115949
NONHSAG059345.2rs7532471Fasting blood glucose20081858
NONHSAG059345.2rs1350629Serum concentration of decanoylcarnitine21886157
NONHSAG059345.2rs12116550Immediate Story Recall20125193
NONHSAG059345.2rs2000259Gene expression of VAV3 in peripheral blood monocytes20502693
NONHSAG059345.2rs2000259Serum concentration of bilirubin (Z,Z)21886157
NONHSAG059345.2rs3747945Gene expression of [probe 940270 centered at chr1:108338518] in blood21829388
NONHSAG059345.2rs2275914Gene expression of VAV3 in peripheral blood monocytes20502693
NONHSAG059345.2rs12563016Gene expression of VAV3 [probe 2426385] in brain cortex19222302
NONHSAG059345.2rs12563016Serum concentration of myo-inositol21886157
NONHSAG059345.2rs1219765Differential exon level expression of VAV3 [probe 2426457] in brain cortex19222302
NONHSAG059345.2rs1219765Sodium levels0
NONHSAG059345.2rs1219765Gene expression of VAV3 [probe 2426385] in brain cortex19222302
NONHSAG059345.2rs1219765Serum concentration of myo-inositol21886157
NONHSAG059345.2rs12127048Gene expression of miR-362 in fibroblasts21147911
NONHSAG059345.2rs12127048Serum concentration of docosahexaenoate (DHA; 22:6n3)21886157
NONHSAG059345.2rs1777467Gene expression of VAV3 [probe 2426385] in brain cortex19222302
NONHSAG059345.2rs1777467Differential exon level expression of VAV3 [probe 2426457] in brain cortex19222302
NONHSAG059345.2rs1777467Differential exon level expression of VAV3 [probe 2426446] in brain cortex19222302
NONHSAG059345.2rs12071280Serum concentration of isovalerylcarnitine21886157
NONHSAG059345.2rs12071280Multiple complex diseases17554300
NONHSAG059345.2rs12071280Coronary artery disease (CAD)17554300
NONHSAG059345.2rs1777463Gene expression of VAV3 [probe 2426385] in brain cortex19222302
NONHSAG059345.2rs1777463Differential exon level expression of VAV3 [probe 2426457] in brain cortex19222302
NONHSAG059345.2rs1781050Differential exon level expression of VAV3 [probe 2426415] in brain cortex19222302
NONHSAG059345.2rs1781050Gene expression of VAV3 [probe 2426385] in brain cortex19222302
NONHSAG059345.2rs1781050Differential exon level expression of VAV3 [probe 2426457] in brain cortex19222302
NONHSAG059345.2rs1781050Differential exon level expression of VAV3 [probe 2426458] in brain cortex19222302
NONHSAG059345.2rs1781050Serum concentration of proline21886157
NONHSAG059345.2rs1781051Serum ratio of (arabinose)/(homostachydrine*)21886157
NONHSAG059345.2rs1781052Serum ratio of (arabinose)/(homostachydrine*)21886157
NONHSAG059345.2rs2996934Gene expression of VAV3 [probe 2426385] in brain cortex19222302
NONHSAG059345.2rs2996934Differential exon level expression of VAV3 [probe 2426457] in brain cortex19222302
NONHSAG059345.2rs2996934Differential exon level expression of VAV3 [probe 2426446] in brain cortex19222302
NONHSAG059345.2rs1418992Serum ratio of (1-arachidonoylglycerophosphoinositol*)/(3-methoxytyrosine)21886157
NONHSAG059345.2rs1418990Gene expression of VAV3 in peripheral blood monocytes20502693
NONHSAG059345.2rs1418990Serum ratio of (1-arachidonoylglycerophosphoinositol*)/(3-methoxytyrosine)21886157
NONHSAG059345.2rs1891680Serum ratio of (1-methylurate)/(taurocholate)21886157
NONHSAG059345.2rs1781070Alzheimer's disease (APOE3 homozygotes)21379329
NONHSAG059345.2rs1781070Alzheimer's disease (late onset)21379329
NONHSAG059345.2rs1781070Gene expression of [probe 940270 centered at chr1:108338518] in blood21829388
NONHSAG059345.2rs1781070Major depressive disorder22472876
NONHSAG059345.2rs12145813Serum ratio of (gamma-glutamylglutamate)/(N2,N2-dimethylguanosine)21886157
NONHSAG059345.2rs12145813Spatial recognition memory19734545
NONHSAG059345.2rs4915093Gene expression of miR-362 in fibroblasts21147911
NONHSAG059345.2rs4915093Serum ratio of (1-methylurate)/(taurochenodeoxycholate)21886157
NONHSAG059345.2rs6583058Triglycerides20686565
NONHSAG059345.2rs2153985Gene expression of GTF3C6 in peripheral blood monocytes20502693
NONHSAG059345.2rs2153985Gene expression of LAMA5 in peripheral blood monocytes20502693
NONHSAG059345.2rs1777458Serum ratio of (1-eicosadienoylglycerophosphocholine*)/(1-myristoylglycerophosphocholine)21886157
NONHSAG059345.2rs4423038Serum ratio of (2-oleoylglycerophosphocholine*)/(linolenate [alpha or gamma; (18:3n3 or 6)])21886157
NONHSAG059345.2rs12569350Serum ratio of (allantoin)/(inosine)21886157
NONHSAG059345.2rs12569350Illegal drug dependence21818250
NONHSAG059345.2rs12569350Serum concentration of 7-methylguanine21886157
NONHSAG059345.2rs17020762Gene expression of LAMA5 in peripheral blood monocytes20502693
NONHSAG059345.2rs17020762Gene expression of GTF3C6 in peripheral blood monocytes20502693
NONHSAG059345.2rs17020762Serum concentration of 7-methylguanine21886157
NONHSAG059345.2rs1122158Serum concentration of ursodeoxycholate21886157
NONHSAG059345.2rs1781077Serum concentration of ursodeoxycholate21886157
NONHSAG059345.2rs1539553Serum ratio of (gamma-glutamylglutamate)/(N2,N2-dimethylguanosine)21886157
NONHSAG059345.2rs1343203Serum concentration of ursodeoxycholate21886157
NONHSAG059345.2rs1343204Serum concentration of urea21886157
NONHSAG059345.2rs1781079Gene expression of probe 242533_at in lymphoblastoid cell lines17873877
NONHSAG059345.2rs1781079Serum ratio of (1-eicosadienoylglycerophosphocholine*)/(1-myristoylglycerophosphocholine)21886157
NONHSAG059345.2rs1781079Gene expression of [probe 940270 centered at chr1:108338518] in blood21829388
NONHSAG059345.2rs1781079Serum concentration of urea21886157
NONHSAG059345.2rs1418998Serum concentration of bradykinin, des-arg(9)21886157
NONHSAG059345.2rs1361829Serum concentration of ursodeoxycholate21886157
NONHSAG059345.2rs17020768Gene expression of GTF3C6 in peripheral blood monocytes20502693
NONHSAG059345.2rs17020768Gene expression of LAMA5 in peripheral blood monocytes20502693
NONHSAG059345.2rs17020768Serum concentration of 7-methylguanine21886157
NONHSAG059345.2rs1113500Serum ratio of (1-eicosadienoylglycerophosphocholine*)/(1-stearoylglycerophosphocholine)21886157
NONHSAG059345.2rs1104781Serum ratio of (alpha-ketoglutarate)/(gamma-tocopherol)21886157
NONHSAG059345.2rs1777454Serum ratio of (2-hydroxypalmitate)/(2-hydroxystearate)21886157
NONHSAG059345.2rs1777454Alcohol dependence21818250
NONHSAG059345.2rs1547794Serum ratio of (gamma-glutamylglutamate)/(N-acetylthreonine)21886157
NONHSAG059345.2rs1781081Serum ratio of (glycerol)/(ursodeoxycholate)21886157
NONHSAG059345.2rs1936008Gene expression of ELAVL1 in peripheral blood monocytes20502693
NONHSAG059345.2rs17020833Gene expression of ELAVL1 in peripheral blood monocytes20502693
NONHSAG059345.2rs17020833Serum ratio of (acetylcarnitine)/(glycerol 2-phosphate)21886157
NONHSAG059345.2rs17020833Refractive error23474815
NONHSAG059345.2rs2995706Gene expression of [probe 940270 centered at chr1:108338518] in blood21829388
NONHSAG059345.2rs7531042Serum ratio of (phenol sulfate)/(tetradecanedioate)21886157
NONHSAG059345.2rs11185247Serum ratio of (dodecanedioate)/(glycerol)21886157
NONHSAG059345.2rs12030503Serum concentration of bradykinin, des-arg(9)21886157
NONHSAG059345.2rs11185248Serum concentration of ursodeoxycholate21886157
NONHSAG059345.2rs1777478Serum ratio of (2-hydroxypalmitate)/(2-hydroxystearate)21886157
NONHSAG059345.2rs1777478Serum concentration of urea21886157
NONHSAG059345.2rs1777478Hypertension, gender differentiated17554300
NONHSAG059345.2rs1777478Multiple complex diseases17554300
NONHSAG059345.2rs1781060Serum concentration of bradykinin, des-arg(9)21886157
NONHSAG059345.2rs1781064Serum concentration of bradykinin, des-arg(9)21886157
NONHSAG059345.2rs1781064PROP taste detection threshold22132133
NONHSAG059345.2rs10494087Serum ratio of (gamma-glutamylglutamine)/(gamma-glutamylthreonine*)21886157
NONHSAG059345.2rs10494088Autism20663923

Potential Function


NA