An integrated knowledge database dedicated to ncRNAs, especially lncRNAs.

Detail infomation of NONHSAT027873.2

General info


NONCODE TRANSCRIPT IDNONHSAT027873.2
NONCODE Gene IDNONHSAG010989.3
Chromosomechr12
Start Site46384039
End Site46388151
Strand+
Exon Number2
CNCI Score-0.0491520
Length527
Assemblyhg38
Other transcript VersionsNONHSAT027873.1(old version)

Sequence


>NONHSAT027873.2
GCGCCCCAAGGAGGGACGCGGGGGTGCAGTCGCGGCCCATTATCTGTGCCCGGGAAGTCCTGAAGGCTCTAGGAGCTGTCAGATTAAACCCCCAGACCCACAAGAAAATCCCTGAAGCTTCGTTGACTTTTGCTGATGGAGCCTCTCTGAAGGGCAAATTCAAAGTACAGCTGGGTGCTGCAGCACTGGAGTGCGAACTTGTGGCTGTGGTTATGAAGGAGCCTCGTCAGCTATGCCTTTAGCCCCTGGTGAAGCAGTGCCAGTCACACTTTGCCAGTCAAACGGAGAGGCAGCAGTAGTAAGaccagaccaaatcaaaccaaaccaagcaaaccaCGGGGAATGGAGGTAGGTGAATAGCGCCAAAGAGAATGATGGCTCACAACACttctaagcatggtgcatatatcagttcatttaagccttatgatgaccctatggggtcagtactattatcgttattatccccaactgaggcacagaacaactgtgtgactaagcgactgtactcaatgtcacaccactgt

Expression Profile(Data Source:Human Body Map)

adiposeadrenalbrainbrain_Rbreastcolonforeskinheart
00000.377686000
heart_RHLF_1HLF_2kidneyliverliver_RlunglymphNode
0.2419370.8216660.36869300.2344261.3631900
ovaryplacenta_RprostateskeltalMuscletestestestes_RthyroidwhiteBloodCell
00.1095850.216512000.17473500
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Exosome Expression Profile(Data Source: NCBI GEO)

A431_cellLine
(Squamous Cell Carcinoma Cell Line Exosomes)
BJ_cellLine
(Foreskin Fibroblast Cell Line Exosomes)
HepG2_cellLine
(Hepatocellular Carcinoma Cell Line Exosomes)
HUVEC_cellLine
(Human Umbilical Vein Endothelial Cell Line Exosomes)
invasive_NFPAs
(Invasive Non-functional Pituitary Adenomas Exosomes)
00000
non-invasive_NFPAs
(Non-invasive Non-functional Pituitary Adenomas Exosomes)
MCF7_cellLine
(Human Breast Cancer Cell Line Exosomes)
MDA-MB-231_cellLine
(Human Breast Cancer Cell Line Exosomes)
tuberculosis_patients_serum
(Active Tuberculosis Patients Serum Exosomes)
normal_people_blood
(Normal People Blood Exosomes)
00000
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Structure Visualization

DataSource: show detail information

See experimental data visualization in DMS dataset or PARS dataset

Isoforms

Transcript ID
NONHSAT162116.1
NONHSAT162117.1
NONHSAT162118.1
NONHSAT162119.1
NONHSAT162120.1
NONHSAT162121.1
NONHSAT162124.1
NONHSAT162126.1
NONHSAT162127.1
NONHSAT231184.1
NONHSAT231185.1
NONHSAT231186.1
NONHSAT231187.1
NONHSAT231188.1
NONHSAT231189.1
NONHSAT231190.1
NONHSAT231191.1
NONHSAT231192.1
NONHSAT231193.1
NONHSAT231194.1
NONHSAT231195.1
NONHSAT231196.1
NONHSAT231197.1
NONHSAT231198.1
NONHSAT231199.1
NONHSAT231200.1
NONHSAT027864.2
NONHSAT027865.2
NONHSAT027866.2
NONHSAT027867.2
NONHSAT027868.2
NONHSAT027869.2
NONHSAT027870.2
NONHSAT027871.2
NONHSAT027876.2
NONHSAT027877.2
NONHSAT027878.2
NONHSAT027885.2
NONHSAT027886.2
NONHSAT027892.2

Data Sources

Source NameOld Id
noncodeV3n373007
ensemblENST00000551021
PMID26117828TCONS_00008536
gencodeENST00000551021.4
noncodeV3Human
lncipedialnc-ARID2-3-5_dup1
NONCODEv4NONHSAT027873
PMID26117828PNCT_HSA161162