An integrated knowledge database dedicated to ncRNAs, especially lncRNAs.

Detail infomation of NONHSAT027878.2

General info


NONCODE TRANSCRIPT IDNONHSAT027878.2
NONCODE Gene IDNONHSAG010989.3
Chromosomechr12
Start Site46388855
End Site46392126
Strand+
Exon Number1
CNCI Score-0.1187840
Length3271
Assemblyhg38
Other transcript VersionsNONHSAT027878.1(old version)

Sequence


>NONHSAT027878.2
ttttatggatgaatgcatctgaggccagacaggaaaatgacttattgctggttgaattgctgattagtggctggattggaggtagaacccagatcatctgcctcttcattctactcATGTCCTGTCATGGAAATTAGTCAATCCAATTATTATTATTATAGAAGTCTGTTTTCACCAGAAAGTTTGTGAACTGACAACCGTAAAATCTGTGGTAAATTCACAGGCTTCATCAATGACACTATGAAATATTGACCCTCAGCTTCCCAGATTGCAACTCCCCAAGTCTTGGTCTGTTTGCTGTTAGGATTTGTTACAACTTCTTCCTTATTGCCTTTTGTTACACAAGCAGTGCTGAATATGGGCTGGATATTGGAAAGAGGGCAAGAAAATGAGAACCCACAGTTCTGTGACGTGACAACACTGATTGGCCAGTCACTGTTATCTGCAGGATGTGCTTTTCTTAAGGATGAACATATTTTGGTCCACAAGTTTCCAAGACAAGCACATTCCTGCCAACATGATCCTTGGACAAACTGTTCTGGAATTTGAACTTGCTACTGGAAGAGGGTTAAGTCCAGGacacacacacacacacacacacacacacacaTTTCAGTGGGGGGCAAGCCATAGTTGGTTATGTTAGCACCTCATTATACAACAGTTTCAAGATAAAGTGATTCCAGATGTGCTCTCAGTAAGTACCTAGTACTTATGTTTTTAACCCATTAGGCTAAAAATCTACTTTCAGAATTTTGGGGAAGCCAGAGTTAGTTAATTAACTAGTCATTCCTAGTTACTTCATAAAGTTGATTCTAAGTCGACTATAATTTGCAGTATGTTTCATGTTAGAGGATACCCATTATAACCATATGAAACATACATATTTATAGACACATATATGTATTTTCACACAGACTTGCCTTTGACAATGATTAGAAGTTCATCTGAAGTACTGGTTTAATGATCATTAGGTTCCTTTGTCCCGGAAATTTCATTTAGAAACATTAGGAAGATATATATCTAAGAAGTAGTATTCTAGTTTCTTCTTATTAATGAAGCTGCAGTGATAGTCATTGTGATTCTGAAGCATAAATTTCATGAGTAAGTCCTGGTTAAAAGGCTCCCTCCCTTGTTTAAAAAACCAAGATTTGAAATTTTTTGCTTTGTAACTTAAATTTACAAAAAAGAGTTAAAGAGAAAAGATGATGAATGTTTTCCTTGATAATTCATATTATTGTTAGGAATATGGAATTTTTGCATCACTTGGCCCTAGAAGGTGGAGAGCTaaaggtgaacatttcattttgctttcaaatattttaaatttgtctgcagaaattatgttttctgctgaatacaatggaagccttcttagctggtctTACTTGAGAATATTGCATCTTAGTATGCTCTTTTGATTTTATTTTGCTCTACAGTAAATTTTTAAAAATTTAGGTATGATATCTGGCATCAAGGACAACACCATTTATTTGCCAAAGGCTGTAACCTAGGGCATTATACACTAAATGGGAATATTGGCAAACATACTGTTCAGAGGTACCTGTTGTGCTGTAGGGCAGTACCTacagcaaagcagtctgggtatgatggactctggatccagactgtttggtttcatttcgcttctgctttttactagctgtgtgctttaatttcatgaatgtgaaagataaataataactcatgaagatttagttaagtctgaacttgtaaaggaagcacttagaaccatgcctggcatatgttaagtacttctcaagtgttagctTAAACAAACAAACAAATCTCAAATTTTGTCTTTGTCATGTCAGAGAGGCTAACATCAAGTGATGGCTGAAGCAGCAAACAGCTAGTTAAATTTAAAAGAAAAATGATCTTTGGGATTAATCCTATCTTGTGAAAAGTTTTCTAGAGCTTCCATCCAGCTGTGGCTAAAGCTAGAGGACAAGAAGGTGAGGAAAGTGTGGCAGAGTGAATGCCATTGATTAAAGAAAGGCCAGGACCTTGCTGTATAACAATTGTTTCTATTATTTCTATTTTGAGAGAAAGACCCTTGATGTTACCCGTCAGCAGGAGATGGATGGTAGTCTTTGTGTGGATTGACAAACATTGGTAGTTTAACAATGTGAAGGGCTTCCTTTGCAGGAAATGAAAAAGTTGTGATTTTCCATAAGTCATTTAGAGAGTCACTATTGAGCCAGCCAGGCTGGGCCCGCTAGTCTATACAATGGTTTTGTGACAATTAGCCTTGTGCTGTTGCAGCATTTCAGACTCATGGAGCGTTTTGCTTagaagacctctcttccttctggctgacacagccccatcccagggtgcagggcctgataagtggagtacaggctggatttcagccctaaccacccgctccccccaggacatggtacagtacacaaatggcacattgaaggtggtagccatgAAGACAGGTTTTTGAATTTTACTTTCTGTTCTTCAGCTCAGGAAATATGTTGTTTATTTTTGTTTTTCAGTCATAGTCTACTTCAATAGCTGGAACTGGGGAAGAGATGGTTCAGTATTTTTTGTCATTGAATCCAATGGTTGATTGTTAATTATTACTTAAGATAATCCACAAACATCCTGCTGACAGTCCAAGACTGTTTTCTATCAGAGGTTTTATGAAGCCACTTAATTTAGGGTTAAGGTCCTGCTGAACCTTACAGGAGTCTAAAAGCAAGGAGAAAGGCATCAGAATATCACACCCTTTTAGCTATAAATCATATTTCTGTAATGCTGTTGCTACTTTTTTTCTATGTGCTCTTGCAATTTAAGATGATGCATTTTATTTCCAATGGTTTGCAATCTGTAACTGAAAGACAGAATGCTCGGAAAAGCCTCTGGCTAAAAACCAGTCTATTGACATAGAATCATGTCAGGAGTGGCCCCAGGAGATTTGTGGGTTTTGGCCTGTCTTGTTTCTCATCCAATATTTCTTTTCAGTATTATCACAGTTAAATTCCTCATTGGATATGCAATAGATTAAAATCACATTAAAGTTTGGACTTAAATCAAGCATAGCAAAAAATGATTCTTTGACATTAGCTCCCAAGATTCTTCTATTATGGTTTCAGTGGTCCTGAACTTTGGAAGATGCTGATCAGGTAATAACTGTTCTGTGCCCTACAAGGAGGATGCCACCTGTAAAAAGGCACTGAGAAGTTTTATTGTCTCAAATATATTTATTCTGATTCTTAAGAAAACTTGAAAT

Expression Profile(Data Source:Human Body Map)


adiposeadrenalbrainbrain_Rbreastcolon
0.02697560.0157390.0018891900.01591440.00251056
foreskinheartheart_RHLF_1HLF_2kidney
00.00599862000.001225760.00271385
liverliver_RlunglymphNodeovaryplacenta_R
0000.005018920.0001655330.025309
prostateskeltalMuscletestestestes_RthyroidwhiteBloodCell
0.0006007300.01193470.02488950.006994330
Loading...


Exosome Expression Profile(Data Source: NCBI GEO)


A431_cellLine
(Squamous Cell Carcinoma Cell Line Exosomes)
BJ_cellLine
(Foreskin Fibroblast Cell Line Exosomes)
HepG2_cellLine
(Hepatocellular Carcinoma Cell Line Exosomes)
HUVEC_cellLine
(Human Umbilical Vein Endothelial Cell Line Exosomes)
invasive_NFPAs
(Invasive Non-functional Pituitary Adenomas Exosomes)
4.928224.9778608.807282.88248
non-invasive_NFPAs
(Non-invasive Non-functional Pituitary Adenomas Exosomes)
MCF7_cellLine
(Human Breast Cancer Cell Line Exosomes)
MDA-MB-231_cellLine
(Human Breast Cancer Cell Line Exosomes)
tuberculosis_patients_serum
(Active Tuberculosis Patients Serum Exosomes)
normal_people_blood
(Normal People Blood Exosomes)
1.89824002.350630
Loading...



Structure Visualization


DataSource: show detail information

See experimental data visualization in DMS dataset or PARS dataset

Isoforms


Transcript ID
NONHSAT162116.1
NONHSAT162117.1
NONHSAT162118.1
NONHSAT162119.1
NONHSAT162120.1
NONHSAT162121.1
NONHSAT162124.1
NONHSAT162126.1
NONHSAT162127.1
NONHSAT231184.1
NONHSAT231185.1
NONHSAT231186.1
NONHSAT231187.1
NONHSAT231188.1
NONHSAT231189.1
NONHSAT231190.1
NONHSAT231191.1
NONHSAT231192.1
NONHSAT231193.1
NONHSAT231194.1
NONHSAT231195.1
NONHSAT231196.1
NONHSAT231197.1
NONHSAT231198.1
NONHSAT231199.1
NONHSAT231200.1
NONHSAT027864.2
NONHSAT027865.2
NONHSAT027866.2
NONHSAT027867.2
NONHSAT027868.2
NONHSAT027869.2
NONHSAT027870.2
NONHSAT027871.2
NONHSAT027873.2
NONHSAT027876.2
NONHSAT027877.2
NONHSAT027885.2
NONHSAT027886.2
NONHSAT027892.2
NONHSAT259190.1
NONHSAT259191.1

Data Sources


Source NameOld Id
noncodeV3n341902
NONCODEv4NONHSAT027878
gencodeENST00000621248.1
lncipedialnc-ARID2-12-1_dup1
ensemblENST00000621248
noncodeV3Human