An integrated knowledge database dedicated to ncRNAs, especially lncRNAs.

Detail infomation of NONHSAT079448.2

General info


NONCODE TRANSCRIPT IDNONHSAT079448.2
NONCODE Gene IDNONHSAG031653.2
Chromosomechr20
Start Site34543974
End Site34544886
Strand+
Exon Number1
CNCI Score-0.0114688
Length912
Assemblyhg38
Other transcript VersionsNONHSAT079448.1(old version)

Sequence


>NONHSAT079448.2
CAAAAATTAAAAATGCTCAAAGGATTATAGGTTTTCTCCTCTTTCGTATGTTTGGCTCTGAGACACTGCATGTTGGCACGTTTTTCATTGAGAATCCTGAAAGCCACCTTTCCATACCAAATTCCCATCTGTCTCTACCAAATTACCAGAAAAAGAAAAAATGAGAAATGGAGGTCTCAGATTCCGTCATCACAGCAGGTAGAAATCAAAGTCACTGAATCCATCAAATTAGTAAGCATACCCCACTGtcagtgaacttcagctgatcagttatgtattgagaaggcaaataacacaattgcagaacatgttcaaaatactagTCCTactgctatggtgaacaagctcaatccaatcaaaagcacctttattttggtctctcactgtctaaatttactctctagggcttgttctcccgctgtccctaggtgagatgtagagcaagcccTGCCCTGGGCAGATGAAGTCCCCGCCCAACACAGGAACTACTCCTTCCAGCCGCGTTTGGAGAGAGGCCGCCCCTTCCACTGTGGGCCCGCGGGGAACCTCGCTCTCTGCAGGGGGAGAGCAGCTTATGTTTGGCCTCGGCCTTATTTTATTTGCCCACTTGGTGCTGTCAGCTCTCTTTCCCAAGTTGCTGAGAGGGGCATGAGGTGGGGAGCAGAAATTCATCGTTCGCCGATACTGCTGTGAACTGGCTTCGGCCGTGGTGCATTTTCATGCGCTTTGACACGCATGCCCCCTGCCCTCTTCTGTTGGTAGCTCCCTCACTTTGAAGGGTGCGCTCCTTCTGGCCGGCCCTATCTTTGGCTCCTGGCTGTCGGGGTCTCCCCTCTACACACTCTCTTCTGTTGAGTCGTGGTGAAGCAGAAACCCCACCGCCTTCCTCCATGGGTTACGATAAGATTCATA

Expression Profile(Data Source:Human Body Map)

adiposeadrenalbrainbrain_Rbreastcolonforeskinheart
000.14811300.0531467000
heart_RHLF_1HLF_2kidneyliverliver_RlunglymphNode
0.1181720000000
ovaryplacenta_RprostateskeltalMuscletestestestes_RthyroidwhiteBloodCell
0.069206900000.05439900
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Exosome Expression Profile(Data Source: NCBI GEO)

A431_cellLine
(Squamous Cell Carcinoma Cell Line Exosomes)
BJ_cellLine
(Foreskin Fibroblast Cell Line Exosomes)
HepG2_cellLine
(Hepatocellular Carcinoma Cell Line Exosomes)
HUVEC_cellLine
(Human Umbilical Vein Endothelial Cell Line Exosomes)
invasive_NFPAs
(Invasive Non-functional Pituitary Adenomas Exosomes)
02.299867.113560.82300618.4872
non-invasive_NFPAs
(Non-invasive Non-functional Pituitary Adenomas Exosomes)
MCF7_cellLine
(Human Breast Cancer Cell Line Exosomes)
MDA-MB-231_cellLine
(Human Breast Cancer Cell Line Exosomes)
tuberculosis_patients_serum
(Active Tuberculosis Patients Serum Exosomes)
normal_people_blood
(Normal People Blood Exosomes)
11.20360011.94950
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Structure Visualization

DataSource: show detail information

See experimental data visualization in DMS dataset or PARS dataset

Isoforms

Transcript ID

Data Sources

Source NameOld Id
lncipedialnc-MAP1LC3A-1-1_dup1
NONCODEv4NONHSAT079448
PMID23818866FPKM1_group_19107_transcr