An integrated knowledge database dedicated to ncRNAs, especially lncRNAs.

Detail infomation of NONHSAT080079.2

General info


NONCODE TRANSCRIPT IDNONHSAT080079.2
NONCODE Gene IDNONHSAG031935.2
Chromosomechr20
Start Site47677900
End Site47686297
Strand+
Exon Number3
CNCI Score-0.0159744
Length2434
Assemblyhg38
Other transcript VersionsNONHSAT080079.1(old version)

Sequence


>NONHSAT080079.2
GCTCGCCTGGCTGGAGCCTCTGGGAGGCCACAGGGGAAGGGCTCCGCTGCCAGAGGTGCAAGCCAGGAGTTGAAGTAGCACCTGGAGGCCAGGAACCTGGTGGCTGTTAAGAGCGCTGGCCACCAGATGTCGCTGCGGCCACACCAGCCTCCCCGCCCTGACTCAGCCCACCTCCCACCTGTCTGACTTGCTCACCCTCACGGTTCCTATTCTGCCTCTCTGGACACCTAGGAATATGTTCCCATCACACCCTCCAGCATTAAAGTTATGGGGCGTGGTgagtcagcatctgaattcccagagctacatccagacttgctgggatacctccgacacgtcactcaatcgctttgggattcagattccaaactgGTCAATGTCCCGGCCCCCTCAACACCTGCCCTGCTCCGTCCTCACCGATTCACCGGCCGCTCCGTGTCCAGCAGCTTGAGGATGGATTTCCCGTCCATATCCGCAGGAAAACCCTGAAGGGCCAGGAGGTCTCGGCCCTGGCCTGGCTGGGGGTTCGGAGCCACGCCCACCAAGAGGCATGCAGCGGGCGCCTACCGTCTCCATGGAGTCGTCCACCGACATGAGGGTCTGCAAGCGCTTCCGCTGGAGCATGTTGGTGAATTCCATGTGGATGGGCTTCATGGGCCCCGTGTAGCGCATGATCCAGTGTTTGTCCGGGTTGGGCGCGTAGTTGTAGCTCGGCGTGCTGGTGGGCAAGGACATACACATCGGTCAAACCCAGGGACAGCCTGGACCCTGCCTGGCCCCCGCCAGACCCGCCCGGATGAGCAGCCACCCTGTGCTGTGTCTGCAGCCCAGGGCCAGGTGTGATCTCCTGGTGGGAAAGGGGACATTGGCATGTCAGGGGCTTATCCAAACCCTGTTTCAGCGTTTCTCCACGTGTGAAGTGTGCACTTGGGAAGCTCCTAAGAGGCACAGCATTCAGTGACCTTGAGTGACAAAGTGAGACAGCCAGTCCCTTGTCGGCTCTCTCagggcaaagtctgtttggtgctagtgtttctttaacacctctctagactttgctcgtcttccttttgaaaaaagggaagaaagtcaagttcagagccttcatcgggaaccagtacccaactcaaattccatagcattgctttgtgtgccttgtacctattattggtagatggcagttacctttggtgaatggcaggtggcagttattgtggttaaggtaggaccacggaatatccttttgcaatagattttagtttgaaataatagaaatggatttaaaaatgaaataagtcatagttttatgtgtaaggccagaattgtgaggaaggcacctgaatgtgcacatttgggaCATGCCACAttcttttttattttttgagacagtctcgctctgtcgctcaggctggagtgcaggggcgcaatctcagctcactgcaacctccacctcccagtatgagtgattctcccgcctcagcctcccaagtagctgggactacaggcgcgtgccaccacacctggctaatttttttgtatttttagtagaaatggggtttcaccatgttagccaggatggtctcgatctcctgacctcgtcatctgcccaccttggcctcccaaagtgttgggattacaggcatgagccactgcacctggcctctttgttttgagatggagtcttgctgtggtccaggctggagtgcagtggtgggatctcagctcactgcagcctttgcctcctgggttcaagtgattctcctgcctcagcctctttagtagctgggactacgggcttgtgtcaacacacctggctaattcttgtagttttagtagagatggggttttgccatgttggccaggctggtcttgaactcctgacctcaggtgatccacccaccttggcctcccaaagttttggcattacaagcatgagccactgcacctggcATGCTGCTTAATCGTGCAGCAGGAGTGTGTTGGGCAAAGTTCTGTCTGAGCACCTGTGATGTGAGGGATGGAGGGACCCCAAGCAGGTATCTATGATGATATCATGGCAGTGGTTGACTATAccagctgctggggttcgagccccagttctgtctttggccagttagtcccctcccaaggcatcagttccctcatttcctacccaaggagaatacagacagtgccagttcccaggaaggttgtgagcactgagggagaggctgtaaggggaacccttctaaccatggccagtgcgtgatgactgcttgggagaggttatcattGGTGTGTCCCTTTGTCATTAGTAATCACGGGTGACTCCACGGCAGAAGTCAGGTACActgggtctgtcactcactccgtgagacagcgggcaggtccccaaacttctctgatcctctctatttcctggttagtcaatgggagatTAAACCAAAACCAGAGG

Expression Profile(Data Source:Human Body Map)


adiposeadrenalbrainbrain_Rbreastcolon
0.1026180.229370.3657120.3324610.2614370.168248
foreskinheartheart_RHLF_1HLF_2kidney
0.05090150.1659370.6595270.1278370.144380.11378
liverliver_RlunglymphNodeovaryplacenta_R
0.016209900.2901860.2012880.2860350.163744
prostateskeltalMuscletestestestes_RthyroidwhiteBloodCell
0.1573760.282890.4567820.3326930.2115340.00786505
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Exosome Expression Profile(Data Source: NCBI GEO)


A431_cellLine
(Squamous Cell Carcinoma Cell Line Exosomes)
BJ_cellLine
(Foreskin Fibroblast Cell Line Exosomes)
HepG2_cellLine
(Hepatocellular Carcinoma Cell Line Exosomes)
HUVEC_cellLine
(Human Umbilical Vein Endothelial Cell Line Exosomes)
invasive_NFPAs
(Invasive Non-functional Pituitary Adenomas Exosomes)
00000
non-invasive_NFPAs
(Non-invasive Non-functional Pituitary Adenomas Exosomes)
MCF7_cellLine
(Human Breast Cancer Cell Line Exosomes)
MDA-MB-231_cellLine
(Human Breast Cancer Cell Line Exosomes)
tuberculosis_patients_serum
(Active Tuberculosis Patients Serum Exosomes)
normal_people_blood
(Normal People Blood Exosomes)
00000
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Structure Visualization


DataSource: show detail information

See experimental data visualization in DMS dataset or PARS dataset

Isoforms


Transcript ID
NONHSAT080080.2

Data Sources


Source NameOld Id
NONCODEv4NONHSAT080079
PMID26117828PNCT_HSA072762
PMID26117828TCONS_00023363
lncipedialnc-NCOA3-1-1_dup1