An integrated knowledge database dedicated to ncRNAs, especially lncRNAs.

Detail infomation of NONHSAT080400.2

General info


NONCODE TRANSCRIPT IDNONHSAT080400.2
NONCODE Gene IDNONHSAG032056.2
Chromosomechr20
Start Site53695304
End Site53696600
Strand+
Exon Number1
CNCI Score-0.0212992
Length1296
Assemblyhg38
Other transcript VersionsNONHSAT080400.1(old version)

Sequence


>NONHSAT080400.2
GGAAATTTAAAAACAATAAGGcacctgtaattccagcactttaggaggccgtggagggtggatcacttgaggttaggcgctcaagaccagtctggccaacatggtgaagccccatctcaactaaaaatactaaaattagcaaggtgtggtgatgcacatctgtaatcccagctactcaggagactgaggcagaagaatcacttgaacctggatgtcagatattgcagtgagctgagctcataccactgcactccagcctgggcgacagagtgagtgagattccatctcaaaaacaaagaaacaaacaaacaaaaCACACACAAAAAAAAAACCACACAAAAAAATAAGGCTCTTAGCAAAATAATAGCTAAGTGTTTTTATTTTATTTTATTTTAAAATTGTACCAAAACCATAGATGAAACTAAGTGTTTTTTTATATCTTCATTAAGTGACAATCAGTTTGTTTGTTTTGGTtttttttttttttaattatttagggatgggagtcttcccttgttgtccagactggtttcaaactcctggcctcaaatgatcctcacacctcagcctcccaaagtgctgagattacaggcgtgggccaccactcccaggcaccaatcacagttctaagaattttacatagatcaactttgttgagtcctcaccattctcatcccacagatgaggaaactgagtcgcagagaggctaaatgcattgttcagggtcacatagctggtTGTGAAGGTGGTGTGTGAATGGCAGGTTTGGAAAGGCCAGGTGTAGGGGCTACATTGTGGAATGCCCCCGGCTCATGATGACTACTTAACTTCCCTCTCCCCTCCTCTTTGCATGCAgtgggcccccagcttctggcttgtactaaacactctgctctcccaactgttatggaatgaaacgggagcaagacttgatgcatactgggtaaatctaaccctgccctgaaaatttggaataattactgaagaagatgtcatctgcacagtagcactgaagtaaatccaattactcaggggagccctggacgccgtcattttcctcagatgcagtcaatctgcaggagagagaagaacgaatacatgcagagagaggcaaagtggagagatggggtcttcctgagccccagtgtttccacttcttagacctggtcctttctcatccacgtcaggctgcacccctcaacttgtcttttggtaactgcccccattcaacctaagctagctggggttggtttttgctttacttAATAAAAACATTTCtttctttctttctttttt

Expression Profile(Data Source:Human Body Map)

adiposeadrenalbrainbrain_Rbreastcolonforeskinheart
000.047305900000
heart_RHLF_1HLF_2kidneyliverliver_RlunglymphNode
00000.0558394000
ovaryplacenta_RprostateskeltalMuscletestestestes_RthyroidwhiteBloodCell
000000.036045500
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Exosome Expression Profile(Data Source: NCBI GEO)

A431_cellLine
(Squamous Cell Carcinoma Cell Line Exosomes)
BJ_cellLine
(Foreskin Fibroblast Cell Line Exosomes)
HepG2_cellLine
(Hepatocellular Carcinoma Cell Line Exosomes)
HUVEC_cellLine
(Human Umbilical Vein Endothelial Cell Line Exosomes)
invasive_NFPAs
(Invasive Non-functional Pituitary Adenomas Exosomes)
12.4384017.5204014.7801
non-invasive_NFPAs
(Non-invasive Non-functional Pituitary Adenomas Exosomes)
MCF7_cellLine
(Human Breast Cancer Cell Line Exosomes)
MDA-MB-231_cellLine
(Human Breast Cancer Cell Line Exosomes)
tuberculosis_patients_serum
(Active Tuberculosis Patients Serum Exosomes)
normal_people_blood
(Normal People Blood Exosomes)
10.1280012.37120
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Structure Visualization

DataSource: show detail information

See experimental data visualization in DMS dataset or PARS dataset

Isoforms

Transcript ID

Data Sources

Source NameOld Id
PMID23818866FPKM1_group_19504_transcr
lncipedialnc-TSHZ2-10-1_dup1
NONCODEv4NONHSAT080400