An integrated knowledge database dedicated to ncRNAs, especially lncRNAs.

Detail infomation of NONHSAT133936.2

General info


NONCODE TRANSCRIPT IDNONHSAT133936.2
NONCODE Gene IDNONHSAG053168.2
Chromosomechr9
Start Site109130294
End Site109133021
Strand-
Exon Number1
CNCI Score-0.3522560
Length2727
Assemblyhg38
Other transcript VersionsNONHSAT133936.1(old version)

Sequence


>NONHSAT133936.2
TTCTGGAATTAAGTTTACTGTCTATATTCAGGATTTTGTGCATAAGAGACGTGACCACTGAGGTTGTGTGTCATTCTTATCTCTACTCcaggggtcagcaaactttctctgttaagggtcagatagtagttttttggcttttcagtctctgtttggctctgctataaacaatacataaatgaatgagcatggctatgttccaataaaacttaattgacactgaactttgaatttcatgtacttttcaaatgtcacaaatgttttccttttgatttttttcagaaagccattaaaaaaatccaaagaccattcttagcttgcaggctgcacaaaaacaggaagcaggcggggtttgcttatggactgtggctttcccacccttgTTCTTAGATAGGgacacaccaatatatcatgattagttgtaaaggatactgccagtaacatattattactggttagttgtaagaatatcaaagttagtgaataatttgcttttaaaataaattattgttgatttatttttataaataaatggcacagggcatctcatgctcttgcattctaatatattttctggaattgatgcaaaagtggtggCAGTAAAGTACAGAGCCGGCTAAGCAGCAGTTTTGTCTTAAGTAACTGTGGTGATCATGGACAACCATTGCGCTGAACTGCTCTTCATGGTAAGGATTTCAGTGTTTCAGAGTAATTCATTAACCTAGAGATGTTTTAAAAAGTTGTATCggccgggcgcggtggctcaagcctgtaatcccagcacttcgggaggccgaggtgggcggatcacgagatcaggagatcgagaccatcctggctgacacggtgaaaccccatctctactaaaaatacaaaaaaaattagctgggcgtggtggcgggagcctgtagtcccagctactcaggaggctgaggcaagagaatggcgtgaacccgggaggtggagctttcaatgagccgagattgcccctctgcactccagcctgggtaacagagcaagactccgtctaaaaaataaataaataaaataaaataaaataaaataaaaGTTGTATCAAAATCTGCTGCAccatgggagtgttttacacatgtgatgtggcatctaccttatgtaccataatggaaaaatgtttgagaaccactgCACTAGGCCAAAGGCTGGGATGTGTATACTTTGCTGCCGTGTATAATTGTATGTCCTTGTTCTCTAAACGGAATTGGTTATGTTTAGTGAACAGTTAGGTGGTTCTCCATGTGTTTATATACAcagacgatccccgaatttggatggttcaacttaagagttttcaaacttacgatgatatgaaagtgatatacatttgataCATTCCTACAACTTACAATGGGGTTATGTCCCATAATTGttttgacttatgatattttcaacttacaattgatgggtttactgagacataaccctcttgtaacttgaggagcatgtgTATATTTGTACATACATGATGGTGTGTGTTTATACACAAAGGCCTGAATATACACACCATGAGCATTTGAAGGTCTTTGTCAAGGTTGTTTCTGTTTCTGATCTCTTGCCTACTTTAAAACCCAAGAGGTAGAACATTATGCATATTACAGGCAAAACTATGCTTGAGTTTATAGCAATGTAGTTTGTAGAAAGGATTCCTGGATGTTTTACTAAGCCTTTCCTCCTCCATTCAACATTATATGAATTGTTAAGAACATATAAAGTACCACTGTTGAATGTGACTTTTCTATACTGTTAGTTAAGAAACCAAGACTAGTGTTAGCTGAGTAACTGGCATGTTGATGCAACCTATACAGGTTTTGTATTTAATTAGGTTCCTTATTCAGTTATTCAAGTATCCAGTTATTTAGTTTCAAGGTAGATTTCTTTGTTTTTATATTTAATAAAAGACTTGCATATAAGTTCCTCTTCATGAAAATAGTGGCTAGGCTAGTGTGATTTTAAGTATGTCTGGCAACTCAAAATGTAATGGATTCATCAAGCTATTTGGGATTTTTAACATAAAACACACTGCTGCTTGATTAATGTGTTCAGTTTTCCCCTGGATATTTGCTATTAGGCTGATAGCCATTTGGTTGGATTCTTCTGGAGAGTAATTGATTCTCTAAGGTAATGGGGTGCTGCAGTGGGTGTAGCATTCACCCAGGTCACTAGAATCCTACCTGTTTCATCACATAGAAGGCCCTGGCCATGGGGAAGAGTGAATGCAGCTTCTCCGGATGCCTTATTTCCACAGACATGCTGATATGCTGGAACAATCTGGCTCCAGGAGTATTAATATACTTTTTTGAGACTGTCTACAAAATACTATTTTGTAAAAACTATGCCTTTACATAGACATTGATAGGTTATATTTGTTTTATAACAATTGTGTACCTAATGTTTGTGATTAATTTTGAGATTTATGTATATTTATAAGCCTATCTTATGTAAATTTTTACTCTAAGATGTGTGGCACATTACTAATAAAGACGTGGATTTCTATTTATGTAAAGTAATTGTAGCAATATTCCTAGATGCTACCTAAATGATTGTTCTGTCCATTTGCCATCACAAATACTTTTATCTTTGGATGATTATGTTAGTCAGAATATATTAATTAGATTTAAACTTTAAAATAAGAATTACAACATAGTTTGAAATTCTTCCTGTTGATGTAATTAAAGTTAGTTTATAATTCCT

Expression Profile(Data Source:Human Body Map)

adiposeadrenalbrainbrain_Rbreastcolonforeskinheart
0.05053550.034328729.590425.97290.08255781.377530.05485520.816896
heart_RHLF_1HLF_2kidneyliverliver_RlunglymphNode
00.3045030.1440640.09909490.0020405200.04480770.112859
ovaryplacenta_RprostateskeltalMuscletestestestes_RthyroidwhiteBloodCell
11.52770.01641660.40787601.461530.4790530.05033640
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Exosome Expression Profile(Data Source: NCBI GEO)

A431_cellLine
(Squamous Cell Carcinoma Cell Line Exosomes)
BJ_cellLine
(Foreskin Fibroblast Cell Line Exosomes)
HepG2_cellLine
(Hepatocellular Carcinoma Cell Line Exosomes)
HUVEC_cellLine
(Human Umbilical Vein Endothelial Cell Line Exosomes)
invasive_NFPAs
(Invasive Non-functional Pituitary Adenomas Exosomes)
00.2997961.518110.598023.35122
non-invasive_NFPAs
(Non-invasive Non-functional Pituitary Adenomas Exosomes)
MCF7_cellLine
(Human Breast Cancer Cell Line Exosomes)
MDA-MB-231_cellLine
(Human Breast Cancer Cell Line Exosomes)
tuberculosis_patients_serum
(Active Tuberculosis Patients Serum Exosomes)
normal_people_blood
(Normal People Blood Exosomes)
3.47922004.702620
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Structure Visualization

DataSource: show detail information

See experimental data visualization in DMS dataset or PARS dataset

Isoforms

Transcript ID

Data Sources

Source NameOld Id
ensemblENST00000561981
NONCODEv4NONHSAT133936
lncipedialnc-C9orf4-1-1_dup1